Job Description P0ADR6 Confidence 96.99% Date Thu Jan 5 11:21:40 GMT 2012 Rank 153 Aligned Residues 209 % Identity 11% Template c2pjdA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribosomal rna small subunit methyltransferase c; PDBTitle: crystal structure of 16s rrna methyltransferase rsmc Resolution 2.10 Å

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		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	I	T	P	I	V	G	M	L	Q	G	V	V	E	K	G	G	E	L	R	V	E	V	A	D	T	N	E	S	K	E	L	L	K	F	C	R	K	F	T	V	P	L	R	A	A	L	R	D	A	G	V	L	A	N	Y	E	T	P	K	R	P	V	V	H	V	F	F	I	A	P	G	C	C	Y	T	G	Y	S
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	E	A	Q	F	Q	L	X	N	L	L	S	L	L	P	V	G	T	D	I	F	V	V	G	E	N	R	S	G	V	R	S	A	E	Q	X	.	.	.	.	.	.	.	.	.	.	.	L	A	D	Y	A	P	L	N	K	V	D	S	A	R	R	C	G	L	Y	F	G	R	L	E	K	Q	P	V	F	D	A	E	K
Template Known Secondary structure													T	T	S		T	T									G	G	G	T	G	G	G					.	.	.	.	.	.	.	.	.	.	.		T	T	T	S									T	T										S						G	G	G
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.												.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.			.	.	.	.	.	.
Predicted Secondary structure																		.	.																																																							.	.
Query SS confidence																		.	.																																																							.	.
Query Sequence		Y	S	N	N	N	S	P	F	Y	M	G	I	P	R	L	K	.	.	F	P	A	D	A	P	S	R	S	T	L	K	L	E	E	A	F	H	V	F	I	P	A	D	E	W	D	E	R	L	A	N	G	M	W	A	V	D	L	G	A	C	P	G	G	W	T	Y	Q	L	V	K	R	N	.	.	M	W	V	Y	S	V
Query Conservation																		.	.																																																							.	.
Alig confidence																		.	.																.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	W	G	E	Y	S	V	D	G	L	T	V	K	T	L	P	G	V	F	S	R	D	G	L	D	V	G	S	Q	L	L	L	S	.	.	.	.	.	.	.	.	.	.	.	T	L	T	P	H	T	K	G	K	V	L	D	V	G	C	G	A	G	V	L	S	V	A	F	A	R	H	S	P	K	I	R	L	T	L	C
Template Known Secondary structure		G							T	T							T	T		T	T	S	S	S											.	.	.	.	.	.	.	.	.	.	.		S		T	T			S	B			B	T	T		T	T	S											T	T		B
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190												.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.							250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.										.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.
Query Sequence		D	N	G	P	M	A	Q	S	L	M	.	.	.	.	.	.	D	T	G	Q	V	T	W	L	R	E	D	G	F	K	F	R	P	T	R	S	N	I	S	W	M	V	C	D	M	V	E	K	.	.	.	.	.	.	.	.	.	P	A	K	V	A	A	L	M	A	Q	W	L	V	N	G	W	C	R	E	T	I	F	N
Query Conservation												.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.																			.	.													.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.
Template Sequence		D	V	S	A	P	A	V	E	A	S	R	A	T	L	A	A	N	G	V	E	G	E	V	F	A	S	N	V	F	S	E	V	K	G	.	.	R	F	D	X	I	I	S	N	P	P	F	H	D	G	M	Q	T	S	L	D	A	A	Q	T	L	I	R	G	A	V	R	H	L	N	S	G	G	E	L	R	I	V	A	N
Template Known Secondary structure			S	B														T	T									S	T	T	T	T			S	.	.													S	S	S															G	G	G
Template Predicted Secondary structure																																				.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260			.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	L	P	M	K	K	R	Y	E	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F	L	P	Y	P	D	V	L	D	E	T
Template Known Secondary structure		T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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