Job Description P0ADR6 Confidence 94.95% Date Thu Jan 5 11:21:40 GMT 2012 Rank 238 Aligned Residues 130 % Identity 9% Template c2cmgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of spermidine synthase from helicobacter2 pylori Resolution 2.0 Å

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		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.								.	.	.	.	.	.
Predicted Secondary structure																													.																																								.	.	.	.	.	.	.
Query SS confidence																													.																																								.	.	.	.	.	.	.
Query Sequence		S	R	S	T	L	K	L	E	E	A	F	H	V	F	I	P	A	D	E	W	D	E	R	L	A	N	G	.	M	W	A	V	D	L	G	A	C	P	G	G	W	T	Y	Q	L	V	K	R	N	M	W	V	Y	S	V	D	N	G	P	M	A	Q	S	L	M	D	T	.	.	.	.	.	.	.	G	Q	V	T	W	L
Query Conservation																													.																																								.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.								.																																								.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.
Template Sequence		K	N	F	L	H	I	E	S	E	L	L	A	H	M	.	.	.	.	.	.	G	G	C	T	K	K	E	L	K	E	V	L	I	V	D	G	F	D	L	E	L	A	H	Q	L	F	K	Y	D	T	H	I	D	F	V	Q	A	D	E	K	I	L	D	S	F	I	S	F	F	P	H	F	H	E	V	K	N	N	K	N
Template Known Secondary structure		G	G	G	T											.	.	.	.	.	.			T	T	S	S									S	S										T	T	S	S								S						G	G	G	T	T	T	S	T	T						T		T	T
Template Predicted Secondary structure																.	.	.	.	.	.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.							.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		258	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		R	E	D	G	F	K	F	R	P	T	R	.	S	N	I	S	W	M	V	C	D	M	V	E	K	P	A	K	V	A	A	L	M	A	Q	W	L	V	N	G	W	C	R	E	T	I	F	N	L	K	L	P	M	K	K	R	Y	E	E	V	S	H	N	L	A	Y	I	Q	A
Query Conservation													.
Alig confidence													.																														.	.	.													.
Template Conservation																																											.	.	.													.
Template Sequence		F	T	H	A	K	Q	L	L	D	L	D	I	K	K	Y	D	L	I	F	C	L	Q	E	P	D	I	H	R	I	D	G	L	K	R	M	L	K	E	D	G	V	.	.	.	F	I	S	V	A	K	H	P	L	L	E	H	.	V	S	M	Q	N	A	L	K	N	M	G	G
Template Known Secondary structure						S	S	G	G	G	S											S	S												T	T							.	.	.								T	T	T			.												T
Template Predicted Secondary structure																																											.	.	.													.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.				.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions