Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6F1
Confidence34.05%DateThu Jan 5 11:02:59 GMT 2012
Rank361Aligned Residues61
% Identity10%Templated8abpa_
SCOP infoPeriplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like
Resolution1.49

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   203......210.........220.........230. ........240.........250.........260........
Predicted Secondary structure 








......












Query SS confidence 




























. . . . . .




































Query Sequence  RNILRMLVDRGCRLTIVPAQTSAEDVLKM. . . . . . NPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGI
Query Conservation   

 
 
   
  
 


     
 
   ...... 






 




      
  

  
   





Alig confidence 




























......







.....























Template Conservation   
    
   
         
       
   
    




 .....                  
 

  
Template Sequence  KFADKAGKDLGFEVIKIAVPDGEKTLNAIDSLAASGAKGFVIC. . . . . TPDPKLGSAIVAKARGYDMKVIAV
Template Known Secondary structure  T

STT

.....
S
GGGTT
Template Predicted Secondary structure 









.....









Template SS confidence 







































































   22.......30.........40.........50.........60.... .....70.........80........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions