 |
Job Description | P0A6F1 | Confidence | 27.22% | Date | Thu Jan 5 11:02:59 GMT 2012 |
Rank | 440 | Aligned Residues | 78 |
% Identity | 6% | Template | d2pd4a1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| Tyrosine-dependent oxidoreductases
|
Resolution | 2.30 |
|
 |
  |   |
193 | . | . | . | . | |
|
|
|
|
. | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | |
|
|
|
. | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  | . | . | . | . | . |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
| . | . | . | . |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | V | V | A | Y | . |
. |
. |
. |
. |
D | F | G | A | K | R | N | I | L | R | M | L | V | D | R | G | C | R | L | T | I | V | P | A | Q | T | . |
. |
. |
. |
S | A | E | D | V | L | K | M | N | P | D | G | I | F | L | S | N | G | P | G | D | P | A | P | C | D | Y | A | I | T | A | I | Q | K | F | L | E | T | D | I |
Query Conservation |   |
  |
|   |
|
| . | . | . | . | . |
|   |
|   |
|   |
|
|   |
|   |
|   |   |   |
|   |   |
|   |
|
|
|   |   |   | . | . | . | . |   |   |
|   |
|   |   |   |   |
|
|
|
|
|
|
|   |
|
|
|
|
|   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
Template Conservation |   |
|   |
|
|
|
|
|
|
|
|   |   |
|
|
|   |
|   |
|   |   |
|
|   |   |
|
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |
Template Sequence |   |
K | K | G | L | I | V | G | V | A | N | N | K | S | I | A | Y | G | I | A | Q | S | C | F | N | Q | G | A | T | L | A | F | T | Y | L | N | E | S | L | E | K | R | V | R | P | I | A | Q | E | L | N | S | P | Y | V | Y | E | L | D | V | S | K | E | E | H | F | K | S | L | Y | N | S | V | K | K | D | L | . |
G | S | L |
Template Known Secondary structure |   |
|  |  |  |  |  |
|
|
| S | T | T | S |  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |  | S | S | T | T | T |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | S |
|  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |
|
|
| . |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | |
. | . | . |
  |
  |   |
264 | . | . | . | . | . | 270 | . |
Predicted Secondary structure |   |
|  |  |  |  |
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
P | V | F | G | I | C | L | G |
Query Conservation |   |
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|
|
Template Sequence |   |
D | F | I | V | H | S | V | A |
Template Known Secondary structure |   |
 |  |  |  |  |
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
86 | . | . | . | 90 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|