|   |
193 | . | . | . | . | . | . | 200 | . | . | . | |
|
. | . | . | . | . | . | 210 | . | . | . | . | . | . | |
|
|
. | . | . | 220 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  | . | . |  |  |  |  |  |  |  |  |
|
|
|  |  | . | . | . |  |  |  |
|
| . | . | . | . | . |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | V | V | A | Y | D | F | G | A | K | R | . |
. |
N | I | L | R | M | L | V | D | R | G | C | R | L | . |
. |
. |
T | I | V | P | A | . |
. |
. |
. |
. |
Q | T | S | A | E | D | V | L | K | M | N | P | D | G | I | F | L | S | N | G | P | G | D | P | A | P | C | D | Y | A | I | T | A | I | Q | K | F | L | E | T | D |
Query Conservation |   |
  |
|   |
|
|
|   |
|   |
|   | . | . |
|
|   |
|   |
|   |   |   |
|   |   |
| . | . | . |   |
|
|
|   | . | . | . | . | . |   |   |   |   |
|   |
|   |   |   |   |
|
|
|
|
|
|
|   |
|
|
|
|
|   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |   |   |   |
|   |
|   |
|   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   | . |   |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   | . |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
K | I | A | I | A | G | K | Y | V | D | A | Y | L | S | L | L | E | A | L | R | H | A | G | I | K | N | R | A | R | V | E | V | K | W | V | D | A | E | S | L | A | D | L | E | E | A | F | R | . |
D | V | S | G | I | L | V | P | G | G | F | G | V | R | G | I | . |
E | G | K | V | R | A | A | Q | Y | A | R | E | R | K |
Template Known Secondary structure |   |
 |  |  |  |  |  | S |
|
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  | G | G | G |
|
|
|  |  |  |  | T | T | . | T |
| S |
|  |  |  |
|
|
|
| S | S | T | T |  | . |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  | . |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
302 | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | |
350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | |
. | . | . | . | 370 | . | . | . | . | . | . | . | . | . |
  |
  |   |
263 | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 300 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | P | V | F | G | I | C | L | G | H | Q | L | L | A | L | A | S | G | A | K | T | V | K | M | K | F | G | H | H | G | G | N | H | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | K | D | V | E | K | N | V | V | M | I | T |
Query Conservation |   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|   |
|   |
|
|   |
|   |
|
|   |   |
|
|   |
|   |
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|
|   |
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
I | P | Y | L | G | I | C | L | G | L | Q | I | A | V | I | E | F | A | R | N | V | A | G | L | K | G | A | N | S | T | E | F | D | P | H | T | P | H | P | V | I | D | L | M | P | E | Q | L | E | V | G | G | T | M | R | L | G | D | W | P | M | R | I | K | P | G | T | L | L | H | R | L | Y | G | K | E | E | V | L | E |
Template Known Secondary structure |   |
|
|  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
| T | T |
|  |  | T | T | T |
| T | T |
| S |
|  |  |  |  |  | S |
| G | G | G |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  |  |  |
|
| S |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
385 | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . |
  |
  |   |
309 | 310 | . | . | . | . | . | . | . | . | |
|
|
|
. | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | |
. | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|  |  |  |  |
|  | . | . | . | . |  |  |
|
|
|
|  |  |  |  |  |  |  |
| . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  | . |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | Q | N | H | G | F | A | V | D | E | . |
. |
. |
. |
A | T | L | P | A | N | L | R | V | T | H | K | S | L | . |
. |
. |
. |
. |
F | D | G | T | L | Q | G | I | H | R | T | D | K | P | A | F | . |
S | F | Q | G | H | P | E | A | S | P | G | P | H | D | A | A | P | L | F | D | H | F | I | E | L | I | E | Q | Y | R |
Query Conservation |   |
|
|   |
|
|   |   |
|   |   | . | . | . | . |   |
|
|
|   |   |   |   |
|   |
|   |
|   | . | . | . | . | . |   |
|   |   |
|
|
|
|   |   |   |   |   |
|
|   | . |
|
|
|
|
|
|
|   |
|
|
|
|   |
|   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |   |   |
|   |   |   |
|
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |   |   |   |
Template Sequence |   |
R | H | R | H | R | Y | E | V | N | P | L | Y | V | D | G | L | E | R | A | G | L | V | V | S | A | T | T | P | G | M | R | G | R | G | A | G | L | V | E | A | I | E | L | K | D | H | P | F | F | L | G | L | Q | S | H | P | E | F | K | S | R | P | M | R | P | S | P | P | F | V | G | F | V | E | A | A | L | A | Y | Q |
Template Known Secondary structure |   |
 |  |  |  | S |  |  |  |
|  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |
|
|
| B | T | T | B | S | T | T |
|  |  |  |  |  |  | T | T | S | S | S |  |  |  |  | S | S |
| G | G | G | G |
| B | T | T | B |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
468 | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . |
  |