 |
Job Description | P0A6F1 | Confidence | 96.78% | Date | Thu Jan 5 11:02:59 GMT 2012 |
Rank | 61 | Aligned Residues | 86 |
% Identity | 19% | Template | d1u9ca_ |
SCOP info | Flavodoxin-like
| Class I glutamine amidotransferase-like
| DJ-1/PfpI
|
Resolution | 1.35 |
|
 |
  |   |
191 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
200 | . | . | . | . | |
|
|
|
. | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  | . | . | . | . |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
Query Sequence |   |
P | F | H | V | V | A | Y | D | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | A | K | R | N | . |
. |
. |
. |
I | L | R | M | L | V | D | R | G | C | R | L | T | I | V | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | Q | T | S | A | E | D |
Query Conservation |   |
  |   |   |
|   |
|
|
|   | . | . | . | . | . | . | . | . | . | . | . |
|   |
|   |
| . | . | . | . |
|   |
|   |
|   |   |   |
|   |   |
|   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
S | K | R | V | L | M | V | V | T | N | H | T | T | I | T | D | D | H | K | T | G | L | W | L | E | E | F | A | V | P | Y | L | V | F | Q | E | K | G | Y | D | V | K | V | A | S | I | Q | G | G | E | V | P | L | D | P | R | S | I | N | E | K | D | P | S | W | A | E | A | E | A | A | L | K | H | T | A | R | L | S | K |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  | T | T |  |  |
|
| B |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | S | S |
| B |
|
|
| B |
| G | G | G | S | S | S |
|
| G | G | G |  |  |  |  |  |  | T | T | S | B |  |  |
|
| G |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
228 | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | |
|
|
. | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | L | K | M | N | P | D | G | I | F | L | S | N | G | P | G | D | P | A | P | C | D | Y | . |
. |
. |
A | I | T | A | I | Q | K | F | L | E | T | D | I | P | V | F | G | I | C | L | G | H | Q | L | L | A |
Query Conservation |   |
|   |   |   |   |
|
|
|
|
|
|
|   |
|
|
|
|
|   |   |   |   |   | . | . | . |   |
|   |   |
|
|   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |
|   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |
|   |
|
|   |
|
|   |   |   |   |
|
|
|
Template Sequence |   |
D | D | A | H | G | F | D | A | I | F | L | P | G | G | H | G | T | M | F | D | F | P | D | N | E | T | L | Q | Y | V | L | Q | Q | F | A | E | D | G | R | I | I | A | A | V | H | G | P | S | G | L | V | N |
Template Known Secondary structure |   |
G | G | G | S | S |
| S |  |  |  |  |
|
|
| T | T |  |  |  |  | S | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
|
| G | G | G | G | G | T | T |
Template Predicted Secondary structure |   |
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|