 |
Job Description | P0A6F1 | Confidence | 48.01% | Date | Thu Jan 5 11:02:59 GMT 2012 |
Rank | 263 | Aligned Residues | 54 |
% Identity | 26% | Template | d1tv5a1 |
SCOP info | TIM beta/alpha-barrel
| FMN-linked oxidoreductases
| FMN-linked oxidoreductases
|
Resolution | 2.40 |
|
 |
  |   |
216 | . | . | . | 220 | . | . | . | . | |
|
|
|
|
|
. | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
| . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | T | I | V | P | A | Q | T | S | . |
. |
. |
. |
. |
. |
A | E | D | V | L | K | M | N | P | D | G | I | F | L | S | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | P | G | D | P | A | P | C | D | Y | A | I | T | A | I | Q | K | F | L | E | T | D | I | P | V | F | G | I | C |
Query Conservation |   |
|   |
|
|
|   |   |   |   | . | . | . | . | . | . |   |
|   |
|   |   |   |   |
|
|
|
|
|
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |
|
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |   |
|   |
|   |
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|
|
|   |   |
|
Template Sequence |   |
V | K | L | A | P | D | L | N | Q | E | Q | K | K | E | I | A | D | V | L | L | E | T | N | I | D | G | M | I | I | S | N | T | T | T | Q | I | N | D | I | K | S | F | E | N | K | K | G | G | V | S | G | A | K | L | K | D | I | S | T | K | F | I | C | E | M | Y | N | Y | T | N | K | Q | I | P | I | I | A | S | G |
Template Known Secondary structure |   |
 |  |  |
| S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
|
|
| B | S |
|
|
|
|
| G | G | G | T | T |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
| S |
|  |  |  |  | S |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
428 | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|