Job Description P0A6F1 Confidence 99.87% Date Thu Jan 5 11:02:59 GMT 2012 Rank 41 Aligned Residues 185 % Identity 15% Template d1t3ta2 SCOP info Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferases (GAT) Resolution 1.90

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		187	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.															.
Predicted Secondary structure													.						.	.																														.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.						.	.																														.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	D	E	L	P	F	H	V	V	A	Y	.	D	F	G	A	K	.	.	R	N	I	L	R	M	L	V	D	R	G	C	R	L	T	I	V	P	A	Q	T	S	A	E	D	V	L	K	M	.	N	P	D	G	I	F	L	S	N	G	P	G	D	P	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C
Query Conservation													.						.	.																														.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.						.	.																														.								.									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.
Template Sequence		A	T	G	A	R	P	K	V	A	V	L	R	E	Q	G	V	N	S	H	V	E	M	A	A	A	F	H	R	A	G	F	D	A	I	D	V	H	M	S	D	L	L	G	G	R	I	G	L	G	N	F	H	A	L	V	A	.	C	G	G	F	S	Y	G	D	V	L	G	A	G	E	G	W	A	K	S	I	L	F	N
Template Known Secondary structure		T	T												T	T	B													T	T														T	S			G	G	G		S					.			B		G	G	G	G	T	T	S	T	T										S
Template Predicted Secondary structure																																																										.
Template SS confidence
		1035	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090		.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.									.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.											.	.	.	.	.	.	.	.	310
Predicted Secondary structure																															.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Query Sequence		D	Y	A	I	T	A	I	Q	K	F	L	E	T	D	I	P	V	F	G	I	C	L	G	H	Q	L	L	A	L	.	.	.	.	.	.	.	.	A	S	G	A	K	T	V	K	M	K	F	G	H	H	G	G	N	H	P	V	K	D	V	E	.	.	.	.	.	.	.	.	.	.	K	N	V	V	M	I	T	A	Q
Query Conservation																															.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	R	V	R	D	E	F	E	T	F	F	H	R	P	Q	T	L	A	L	G	V	N	G	C	Q	M	M	S	N	L	R	E	L	I	P	G	S	E	L	W	P	R	F	V	R	N	H	S	D	R	F	E	A	R	F	S	L	V	E	V	T	Q	S	P	S	L	L	L	Q	G	M	V	G	S	Q	M	P	I	A	V
Template Known Secondary structure														S	S	S														T	T	G	G	G	S	T	T		T	T								T	T	S	S														S		G	G	G	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		1114	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.
		311	.	.					.	.	.	.	.	.	320	.					.	.	.	.	.	.	.	.	330	.	.	.	.																.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.									.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.									.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Query Sequence		N	H	G	.	.	.	.	F	A	V	D	E	A	T	L	.	.	.	.	P	A	N	L	R	V	T	H	K	S	L	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	L	Q	G	I	H	R	T	D	K	P	A	F	S	F	Q	G	H	P	E	A	S	P	.	.	.	.	.	.	.	.	.
Query Conservation					.	.	.	.									.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.									.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	H	G	E	G	R	V	E	V	R	D	D	A	H	L	A	A	L	E	S	K	G	L	V	A	L	R	Y	V	D	N	F	G	K	V	T	E	T	Y	P	A	N	P	N	G	S	P	N	G	I	T	A	V	T	T	E	N	G	R	V	T	I	M	M	P	H	P	E	R	V	F	R	T	V	A	N	S	W	H	P
Template Known Secondary structure				S	S						S	S										T	T							B		T	T	S		B			S	T	T	T	S	S	S			G	G	G							T	T	S	S					S	S	B	G	G	G	S	S	B	G	G	G		S	S
Template Predicted Secondary structure
Template SS confidence
		1195	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.
						359	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	G	P	H	D	A	A	P	L	F	D	H	F	I	E
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		E	N	W	G	E	D	S	P	W	M	R	I	F	R	N	A	R	K
Template Known Secondary structure		T	T			S	B		T	T
Template Predicted Secondary structure
Template SS confidence
		1275	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions