 |
Job Description | P0A6F1 | Confidence | 26.52% | Date | Thu Jan 5 11:02:59 GMT 2012 |
Rank | 451 | Aligned Residues | 96 |
% Identity | 24% | Template | d1jr1a1 |
SCOP info | TIM beta/alpha-barrel
| Inosine monophosphate dehydrogenase (IMPDH)
| Inosine monophosphate dehydrogenase (IMPDH)
|
Resolution | 2.60 |
|
 |
  |   |
191 | . | . | . | . | . | . | . | . | 200 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 210 | . | . | . | . | . | . | . | . | |
|
|
|
. | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 250 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|  |  | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . | . |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
Query Sequence |   |
P | F | H | V | V | A | Y | D | F | G | A | K | R | N | . |
. |
. |
. |
. |
I | L | R | M | L | V | D | R | G | C | R | L | T | I | . |
. |
. |
. |
V | P | A | Q | T | S | A | E | D | V | L | K | M | N | P | D | G | I | F | L | S | N | G | P | G | D | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | P | C | D | Y |
Query Conservation |   |
  |   |   |
|   |
|
|
|   |
|   |
|   |
| . | . | . | . | . |
|   |
|   |
|   |   |   |
|   |   |
|   |
| . | . | . | . |
|
|   |   |   |   |   |
|   |
|   |   |   |   |
|
|
|
|
|
|
|   |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|
|   |   |   |   |   |
|
|
|
|   |
|   |
|   |
|   |
|   |
|   |   |
|   |   |
|
|
|
|   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
Template Sequence |   |
G | V | D | V | V | V | L | D | S | S | Q | G | N | S | I | F | Q | I | N | M | I | K | Y | M | K | E | K | Y | P | N | L | Q | V | I | G | G | N | V | V | T | A | A | Q | A | K | N | L | I | D | A | G | V | D | A | L | R | V | G | M | G | C | G | S | I | C | I | T | Q | E | V | L | A | C | G | R | P | Q | A | T | A |
Template Known Secondary structure |   |
T |
|
|  |  |  |  |
|
| S | S |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T |
|  |  |  |  |  |  |  |
| S |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |
| S | S |
| S | T | T | B |
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
267 | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . |
  |
  |   |
251 | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | |
|
|
. | . | . | 270 | . | . | . | . | . | |
. | . | . | . | 280 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  | . | . | . |  |  |
|  |  |  |  |  |  | . |  |  |  |
|
|
|  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | I | T | A | I | Q | K | F | L | E | T | D | I | P | V | F | . |
. |
. |
G | I | C | L | G | H | Q | L | L | . |
A | L | A | S | G | A | K | T | V | K | M |
Query Conservation |   |
  |
|   |   |
|
|   |   |
|   |   |   |
|
|
|
| . | . | . |
|
|
|
|
|   |
|
|
| . |
|   |
|   |
|
|   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|
|
|
|   |
|   |
|
|   |
|
|
|
|
|
|
|
|
|
|   |
|
Template Sequence |   |
V | Y | K | V | S | E | Y | A | R | R | F | G | V | P | V | I | A | D | G | G | I | Q | N | V | G | H | I | A | K | A | L | A | L | G | A | S | T | V | M | M |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | G | G | G | T |
|
|  |  |  |  | S |
|
|
| S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
347 | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|