 |
Job Description | P0A6F1 | Confidence | 61.91% | Date | Thu Jan 5 11:02:59 GMT 2012 |
Rank | 184 | Aligned Residues | 73 |
% Identity | 14% | Template | d1f06a1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
|
Resolution | 2.10 |
|
 |
  |   |
190 | . | . | . | . | . | . | . | . | . | 200 | |
. | . | . | . | . | . | . | . | . | 210 | . | . | |
. | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | P | F | H | V | V | A | Y | D | F | G | . |
A | K | R | N | I | L | R | M | L | V | D | R | . |
G | C | R | L | T | I | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | A | Q | T | S | A | E | D | V | L | K | M | N | P | D | G | I | F | L | S | N | G | P | G | D | P | A | P | C | D | Y | A | I | T | A |
Query Conservation |   |
  |   |   |   |
|   |
|
|
|   |
| . |   |
|   |
|
|   |
|   |
|   |   |   | . |
|   |   |
|   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |
|   |
|   |   |   |   |
|
|
|
|
|
|
|   |
|
|
|
|
|   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
| . | . |
|
|
Template Conservation |   |
  |   |
|
|
|   |
|
|
|   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |   | . |   |   |
|   |
|   |
| . | . | . | . |   |
|
|   |   |   |
|   | . | . |   |   |
Template Sequence |   |
T | N | I | R | V | A | I | V | G | Y | G | N | L | G | R | S | V | E | K | L | I | A | K | Q | P | D | M | D | L | V | G | I | F | S | R | R | A | T | L | D | T | K | T | P | V | F | D | V | A | D | V | D | K | H | A | D | . |
D | V | D | V | L | F | L | . |
. |
. |
. |
C | M | G | S | A | T | D | I | . |
. |
P | E |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  | T | T |
| S | S |  |  |  |  |  |  |  |  | S | S | S |
|
| S | S | S | S |
|  |  |  | G | G | G | G | G | G | T | T | T | . | T |
| S |  |  |  |  | . | . | . | . |
| S |
| T | T | T |  |  | . | . |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |
| . |
|
|
|  |  |  |  | . | . | . | . |
|
|
|
|
|
|
|  | . | . |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
. | . | 60 | . | . | . | . | |
|
|
|
. | . | . | . | . | 70 | . | . | |
|
. | . |
  |
  |   |
255 | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | Q | K | F | L | E | T | D | I | P | V | F | G | I | C |
Query Conservation |   |
|
|   |   |
|   |   |   |
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |
|
|   |
|
|   |   |
|
|
Template Sequence |   |
Q | A | P | K | F | A | Q | F | A | C | T | V | D | T | Y |
Template Known Secondary structure |   |
 |  |  |  |  | T | T | T | S |  |  |  |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|