Job Description P0A6F1 Confidence 62.42% Date Thu Jan 5 11:02:59 GMT 2012 Rank 182 Aligned Residues 131 % Identity 20% Template c3thaB_ PDB info PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: tryptophan synthase subunit alpha from campylobacter jejuni. Resolution 2.37 Å

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		52	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure											.																																															.	.	.
Query SS confidence											.																																															.	.	.
Query Sequence		I	V	T	L	T	Y	P	H	I	.	G	N	V	G	T	N	D	A	D	E	E	S	S	Q	V	H	A	Q	G	L	V	I	R	D	L	P	L	I	A	S	N	F	R	N	T	E	D	L	S	S	Y	L	K	R	H	N	.	.	.	I	V	A	I	A	D	I	D	T	R	K	L	T	R	L	L	R	E	K	G	A
Query Conservation											.																																															.	.	.
Alig confidence											.																																.	.	.	.	.											.	.	.
Template Conservation																																											.	.	.	.	.
Template Sequence		L	V	F	X	V	Y	Y	N	L	I	F	S	Y	G	L	E	K	F	V	K	K	A	K	S	L	G	I	C	A	L	I	V	P	E	L	S	F	E	E	S	D	.	.	.	.	.	D	L	I	K	E	C	E	R	Y	N	I	A	L	I	T	L	V	S	V	T	T	P	K	E	R	V	K	K	L	V	K	H	A	K
Template Known Secondary structure																										T	T							T	T			G	G	G			.	.	.	.	.										T									T	T	S										T	T
Template Predicted Secondary structure																																											.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.						.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		Q	N	G	C	I	I	A	G	D	N	P	D	A	A	L	A	L	E	K	A	R	A	F	P	G	L	N	G	M	D	L	A	K	E	V	T	T	A	E	A	Y	S	W	T	Q	G	S	W	T	L	T	G	G	L	P	E	A	K	K	E	D	E	L	P	F	H	V	V	A	Y	D	F	G	A	K	R	.	N	I	L
Query Conservation																																																																														.
Alig confidence																									.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation																									.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	F	I	Y	L	L	A	S	I	G	I	T	G	T	K	S	V	E	E	A	I	L	Q	.	.	.	.	.	.	D	K	V	K	E	I	R	S	F	T	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	I	F	V	G	F	G	I	Q	N	N	Q	D	V
Template Known Secondary structure		S								S		S	S												.	.	.	.	.	.								T	T			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S			S	S
Template Predicted Secondary structure																									.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.							.	.	.	.	190	.	.	.	.	.	.	.																										.	.	200	.	.	.	.	.	.	.	.	.	210	.
		207	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	L	V	D	R	G	C	R	L	T	I	V
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		K	R	X	R	K	.	V	A	D	G	V	I	V
Template Known Secondary structure					T	T	.	T	S	S
Template Predicted Secondary structure							.
Template SS confidence
		212	.	.	.	.		.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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