 |
Job Description | P0A6F1 | Confidence | 75.66% | Date | Thu Jan 5 11:02:59 GMT 2012 |
Rank | 121 | Aligned Residues | 60 |
% Identity | 22% | Template | c3pfnB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:nad kinase; |
PDBTitle: crystal structure of human nad kinase
|
Resolution | 2.70 Å |
|
 |
  |   |
205 | . | . | . | . | 210 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | L | R | M | L | V | D | R | G | C | R | L | T | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | P | A | Q | T | S | A | E | D | V | L | K | M | N | P | D | G | I | F | L | S | N | G | P | G | D | P | A | P | C | D | Y | A | I | T | A | I | Q | K | F | L | E | T |
Query Conservation |   |
|   |
|   |
|   |   |   |
|   |   |
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |   |   |   |
|   |
|   |   |   |   |
|
|
|
|
|
|
|   |
|
|
|
|
|   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |   |
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |
|
|
|
|   |
|
|
|
|
| . | . | . | . | . | . |
|   |
|   |
|   |   |   |   |   |   |   |
Template Sequence |   |
L | C | T | H | L | X | E | E | N | X | I | V | Y | V | E | K | K | V | L | E | D | P | A | I | A | S | D | E | S | F | G | A | V | K | K | K | F | C | T | F | R | E | D | Y | D | D | I | S | N | . |
Q | I | D | F | I | I | C | L | G | G | D | G | . |
. |
. |
. |
. |
. |
T | L | L | Y | A | S | S | L | F | Q | G | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  |  | S |  |  |  |  | S |
| S | T | T |  |  |  |  |  |  |
|  |  |  |
| T | T | T |
|
|
| T | T | . | T |
| S |  |  |  |  |  | S | S | T | T | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
| S | S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |
|
|
|  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
125 | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | |
. | . | . | . | . | . | 180 | . | . | . | . | . | |
|
|
|
|
|
. | . | . | . | 190 | . | . | . | . | . | . | . |
  |
  |   |
262 | . | . | . | . | . | . | . | 270 | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | I | P | V | F | G | I | C | L | G |
Query Conservation |   |
  |
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|
|
|   |
|
Template Sequence |   |
V | P | P | V | X | A | F | H | L | G |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  | S | S |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
  |   |
198 | . | 200 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|