Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6F1
Confidence53.26%DateThu Jan 5 11:02:59 GMT 2012
Rank228Aligned Residues71
% Identity20%Templatec3outC_
PDB info PDB header:isomeraseChain: C: PDB Molecule:glutamate racemase; PDBTitle: crystal structure of glutamate racemase from francisella tularensis2 subsp. tularensis schu s4 in complex with d-glutamate.
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   194.....200.. .......210......... 220.. .......230.........240.........250..
Predicted Secondary structure 



.


........


............











Query SS confidence 








.
















. . . . . . . .


. . . . . . . . . . . .





























Query Sequence  VVAYDFGAK. RNILRMLVDRGCRLTIV. . . . . . . . PAQ. . . . . . . . . . . . TSAEDVLKMNPDGIFLSNGPGDPAPCDYAI
Query Conservation 
 


 
 
. 

 
 
   
  
 

........
  ............   
 
    






 




      
Alig confidence 








.
















........


............















...


.






Template Conservation 






 




   
    
     
  
    


 

   
          
   
 
 


...


.


    
Template Sequence  IGVFDSGIGGLTIVKNLXSILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTAKFLIDQEVKAIII. . . ACN. TISAIAK
Template Known Secondary structure  SSSTT
TT


TTT


TTS
TT
S...

.
Template Predicted Secondary structure 























...


.


Template SS confidence 















































































   7..10.........20.........30.........40.........50.........60.........70.. ... ....80..
 
   253......260.........
Predicted Secondary structure 




Query SS confidence 
















Query Sequence  TAIQKFLETDIPVFGIC
Query Conservation    

  
   






Alig confidence 






.








Template Conservation    

   .  






Template Sequence  DIVQEIA. KAIPVIDVI
Template Known Secondary structure  S.SSS
Template Predicted Secondary structure 
.






Template SS confidence 
















   83...... 90........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions