Job Description P0A6F1 Confidence 99.96% Date Thu Jan 5 11:02:59 GMT 2012 Rank 24 Aligned Residues 275 % Identity 22% Template c3nvaB_ PDB info PDB header:ligase Chain: B: PDB Molecule:ctp synthase; PDBTitle: dimeric form of ctp synthase from sulfolobus solfataricus Resolution 2.50 Å

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		A	D	E	E	S	S	Q	V	H	A	Q	G	L	V	I	R	D	L	P	L	I	A	S	N	F	R	N	T	E	D	L	S	S	Y	L	K	R	H	N	I	V	A	I	A	D	I	D	T	.	R	K	L	T	R	L	L	R	E	K	G	A	Q	N	G	C	I	I	A	G	D	N	P	D	A	A	L	A	L	E	K
Query Conservation																																																		.
Alig confidence																																																		.
Template Conservation
Template Sequence		Q	E	L	R	R	I	G	I	Q	P	D	F	I	V	G	R	A	T	L	P	L	D	D	E	T	R	R	K	I	A	L	F	T	N	V	K	V	D	H	I	V	S	S	Y	D	V	E	T	S	Y	E	V	P	I	I	L	E	S	Q	K	L	V	S	K	I	L	S	R	L	K	L	E	D	R	Q	V	D	L	T	D
Template Known Secondary structure								T				S							S	S															T			G	G	G								S		G	G	G								T	T										T
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.						.	.	.	.	.	.	210	.					.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.									.	.	.	.
Query SS confidence																																																											.	.	.	.	.									.	.	.	.
Query Sequence		A	R	A	F	P	G	L	N	G	M	D	L	A	K	E	V	T	T	A	E	A	Y	S	W	T	Q	G	S	W	T	L	T	G	G	L	P	E	A	K	K	E	D	E	L	P	F	H	V	V	A	Y	D	F	G	A	K	R	.	.	.	.	.	N	I	L	R	M	L	V	D	.	.	.	.	R	G	C	R	L	T
Query Conservation																																																											.	.	.	.	.									.	.	.	.
Alig confidence						.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.									.	.	.	.
Template Conservation						.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	I	S	F	.	.	.	.	.	V	N	N	I	K	G	I	N	S	K	K	T	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	A	L	V	G	K	Y	T	K	L	K	D	S	Y	I	S	I	K	E	A	I	Y	H	A	S	A	Y	I	G	V	R	P	K
Template Known Secondary structure						.	.	.	.	.					T	T	T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S	S	T	T	S	S	S	T	T														T	T
Template Predicted Secondary structure						.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		278	.	280	.						.	.	.	.	.	.	.	.	290	.	.	.	.																									.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		218									.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.
Query Sequence		I	.	.	.	.	.	.	.	.	V	P	A	Q	T	S	A	E	D	V	L	K	M	N	P	D	G	I	F	L	S	N	G	P	G	D	P	A	P	C	D	Y	A	I	T	A	I	Q	K	F	L	E	T	D	I	P	V	F	G	I	C	L	G	H	Q	L	L	A	L	A	S	G	A	K	T	V	K	M	K	F	G
Query Conservation			.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.													.														.
Template Conservation																							.														.
Template Sequence		L	I	W	I	E	S	T	D	L	E	S	D	T	K	N	L	N	E	I	L	G	.	N	V	N	G	I	I	V	L	P	G	F	G	S	.	R	G	A	E	G	K	I	K	A	I	K	Y	A	R	E	H	N	I	P	F	L	G	I	C	F	G	F	Q	L	S	I	V	E	F	A	R	D	V	L	G	L	S	E	A
Template Known Secondary structure							G	G	G	G			S	S	S			T	T	T	S	S	.	S		S						S			S	S	.	T	T														T	T							T														T	T			T	T
Template Predicted Secondary structure																							.														.
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
		290	.						.	.	.	.	.	.	.	.	300	.	.	.																																	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.					.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Query SS confidence				.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Query Sequence		H	H	.	.	.	.	.	G	G	N	H	P	V	K	D	V	E	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	M	I	T	A	Q	N	H	G	F	A	V	D	E	A	T	L	.	.	.	.	P	A	N	L	R	V	T
Query Conservation				.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Alig confidence				.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation
Template Sequence		N	S	T	E	I	N	P	N	T	K	D	P	V	I	T	L	L	D	E	Q	K	N	V	T	Q	L	G	G	T	M	R	L	G	A	Q	K	I	I	L	K	E	G	T	I	A	Y	Q	L	Y	G	K	K	V	V	Y	E	R	H	R	H	R	Y	E	V	N	P	K	Y	V	D	I	L	E	D	A	G	L	V	V	S
Template Known Secondary structure				T	T	T		T	T		S							B		T	T	S		B		S	S															T	T	S							T	S	S																							T	T
Template Predicted Secondary structure
Template SS confidence
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		H	K	S	L	F	D	G	T	L	Q	G	I	H	R	T	D	K	P	A	F	.	S	F	Q	G	H	P	E	A	S	P	G	P	H	D	A	A	P	L	F	D	H	F	I	E	L	I
Query Conservation																						.
Alig confidence					.																	.
Template Conservation					.
Template Sequence		G	I	S	.	E	N	G	L	V	E	I	I	E	L	P	S	N	K	F	F	V	A	T	Q	A	H	P	E	F	K	S	R	P	T	N	P	S	P	I	Y	L	G	F	I	R	A	V
Template Known Secondary structure					.	T	T	S								T	T	S	S	S					S	S		G	G	G	G		B	T	T	B
Template Predicted Secondary structure					.
Template SS confidence
		487	.	.		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions