Phyre 2 alignment of P0A6F1 with c3l6uA

Job Description P0A6F1
Confidence 28.51% Date Thu Jan 5 11:02:59 GMT 2012

Rank 417 Aligned Residues 61

% Identity 26% Template c3l6uA_

PDB info PDB header:transport protein Chain: A: PDB Molecule:abc-type sugar transport system periplasmic PDBTitle: crystal structure of abc-type sugar transport system,2 periplasmic component from exiguobacterium sibiricum

Resolution 1.90 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.								.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.
Query Sequence	R	N	I	L	R	M	L	V	D	R	G	C	R	L	T	I	V	P	A	Q	T	S	A	E	.	.	.	.	.	.	.	D	V	L	K	M	N	P	D	G	I	F	L	S	N	G	P	G	D	P	A	P	C	D	Y	A	I	T	A	I	Q	K	F	L	E	T	D	I	P	V	F	G	I
Query Conservation																									.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.																		.	.	.	.	.
Template Conservation																																																	.	.	.	.	.
Template Sequence	N	A	F	K	A	E	A	K	A	N	K	Y	E	A	L	V	A	T	S	Q	N	S	R	I	S	E	R	E	Q	I	L	E	F	V	H	L	K	V	D	A	I	F	I	T	T	L	D	D	.	.	.	.	.	V	Y	I	G	S	A	I	E	E	A	K	K	A	G	I	P	V	F	A	I
Template Known Secondary structure										T	T									S	S															T	T		S							S		T	.	.	.	.	.	T	T	T										T	T
Template Predicted Secondary structure																																																	.	.	.	.	.
Template SS confidence
	28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.						.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.

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Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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