Job Description P0A6F1 Confidence 99.96% Date Thu Jan 5 11:02:59 GMT 2012 Rank 29 Aligned Residues 181 % Identity 20% Template c3fijD_ PDB info PDB header:structural genomics, unknown function Chain: D: PDB Molecule:lin1909 protein; PDBTitle: crystal structure of a uncharacterized protein lin1909 Resolution 2.30 Å

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		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.																		.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																																											.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	F	H	V	V	A	Y	D	F	G	A	K	R	N	I	L	R	M	L	V	D	R	G	C	R	L	T	I	V	P	A	Q	T	S	A	E	D	V	L	K	M	.	N	P	D	G	I	F	L	S	N	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	P	A	P	C	D	Y	A	I
Query Conservation																																											.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.																																.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.
Template Sequence		K	P	V	I	G	I	T	.	.	.	G	Q	Q	R	Y	V	D	A	I	Q	K	V	G	G	F	P	I	A	L	P	I	D	D	P	S	T	A	V	Q	A	I	S	L	V	D	G	L	L	L	T	G	G	Q	D	I	T	P	Q	L	Y	L	E	E	P	S	Q	E	I	G	A	Y	F	P	P	R	D	S	Y	E	I
Template Known Secondary structure									.	.	.												T	T											G	G	G							T		S								S				G	G	G	G	T					T	T
Template Predicted Secondary structure									.	.	.
Template SS confidence
		4	.	.	.	.	.	10				.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.																					.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	I	Q	K	F	L	E	T	D	I	P	V	F	G	I	C	L	G	H	Q	L	L	A	L	A	S	G	A	K	T	V	K	M	K	F	G	H	H	G	G	N	H	P	V	K	D	V	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	V	M	I	T	A	Q	N	H
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	V	R	A	A	L	D	A	G	K	P	I	F	A	I	C	R	G	X	Q	L	V	N	V	A	L	G	G	T	L	Y	Q	D	I	S	Q	V	E	T	K	A	L	Q	H	L	Q	R	V	D	E	Q	L	G	S	H	T	I	D	I	E	P	T	S	E	L	A	K	H	H	P	N	K	K	L	V	N	S	L	H
Template Known Secondary structure											T							T										T	T					S	S	G	G	G	S	S	S						B			S		T	T	S									T	T	S	T	G	G	G	T	S		T	T						B
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.			.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.		.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.																			.
Query SS confidence																																				.	.																			.
Query Sequence		G	F	A	V	D	E	A	T	L	P	A	N	L	R	V	T	H	K	S	L	F	D	G	T	L	Q	G	I	H	R	T	D	K	P	.	.	A	F	S	F	Q	G	H	P	E	A	S	P	G	P	H	D	A	A	.	P	L	F	D	H	F	I	E	L	I	E	Q	Y
Query Conservation																																				.	.																			.
Alig confidence								.	.													.														.	.																			.
Template Conservation								.	.													.
Template Sequence		H	Q	F	I	K	K	.	.	L	A	P	S	F	K	V	T	A	R	T	A	.	D	G	X	I	E	A	V	E	G	D	N	L	P	S	W	Y	L	G	V	Q	W	H	P	E	L	X	F	Q	T	D	P	E	S	E	Q	L	F	Q	A	L	V	D	E	S	K	K	T
Template Known Secondary structure		S					S	.	.			T	T								T	.	T									S	S		S	S						S	S		G	G	G	T	T	T	T																	T
Template Predicted Secondary structure								.	.													.
Template SS confidence
		179	180	.	.	.	.			.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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