Job Description P0A6F1 Confidence 47.87% Date Thu Jan 5 11:02:59 GMT 2012 Rank 266 Aligned Residues 30 % Identity 17% Template c2zkqb_ PDB info PDB header:ribosomal protein/rna Chain: B: PDB Molecule:rna expansion segment es3; PDBTitle: structure of a mammalian ribosomal 40s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	G	I	F	L	S	N	G	P	G	D	P	A	P	C	D	Y	A	I	T	A	I	Q	K	F	L	E	T	D	I	P	V	F	G	I	C
Query Conservation
Alig confidence								.	.	.	.									.	.	.
Template Conservation								.	.	.	.									.	.	.
Template Sequence		P	R	L	L	V	V	.	.	.	.	T	D	P	R	A	D	H	Q	.	.	.	P	L	T	E	A	S	Y	V	N	L	P	T	I	A	L	C
Template Known Secondary structure			S					.	.	.	.	S		T	T	T	T			.	.	.									T
Template Predicted Secondary structure								.	.	.	.									.	.	.
Template SS confidence
		118	.	120	.	.	.					.	.	.	.	.	.	130	.				.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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