Job Description P0A6F1 Confidence 87.70% Date Thu Jan 5 11:02:59 GMT 2012 Rank 88 Aligned Residues 65 % Identity 20% Template c2zkiH_ PDB info PDB header:transcription Chain: H: PDB Molecule:199aa long hypothetical trp repressor binding PDBTitle: crystal structure of hypothetical trp repressor binding2 protein from sul folobus tokodaii (st0872) Resolution 2.90 Å

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		191	.	.	.	.	.	.	.	.	200	.	.	.	.							.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.																						.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	F	H	V	V	A	Y	D	F	G	A	K	R	N	.	.	.	.	.	.	I	L	R	M	L	V	D	R	G	C	R	L	T	I	V	P	A	Q	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	D	V	L	K	M	N	P	D	G	I	F	L	S	N	G	P	G
Query Conservation																.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.						.	.	.	.
Template Conservation																																																																						.	.						.	.	.	.
Template Sequence		K	P	N	I	L	V	L	F	Y	G	Y	G	S	I	V	E	L	A	K	E	I	G	K	G	A	E	E	A	G	A	E	V	K	I	R	R	V	R	E	T	L	P	P	E	F	Q	S	R	I	P	F	D	K	V	K	D	I	P	E	V	T	L	D	D	M	R	W	A	.	.	D	G	F	A	I	.	.	.	.	G
Template Known Secondary structure												S	S																	T												S		G	G	G		T	T			G	G	G	S	T	T	S		B										.	.	S					.	.	.	.
Template Predicted Secondary structure																																																																						.	.						.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.					.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	A	P	C	D	Y	A	I	T	A	I	Q	K	F	L	E	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	P	T	R	Y	G	N	M	A	G	G	L	K	T	F	L	D	T
Template Known Secondary structure					B	T	T	B											T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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