Job Description P0A6F1 Confidence 99.92% Date Thu Jan 5 11:02:59 GMT 2012 Rank 39 Aligned Residues 167 % Identity 17% Template c2ywdA_ PDB info PDB header:transferase Chain: A: PDB Molecule:glutamine amidotransferase subunit pdxt; PDBTitle: crystal structure of glutamine amidotransferase Resolution 1.90 Å

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		193	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.						.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure									.																																																						.	.	.	.	.
Query SS confidence									.																																																						.	.	.	.	.
Query Sequence		H	V	V	A	Y	D	F	.	G	A	K	R	N	I	L	R	M	L	V	D	R	G	C	R	L	T	I	V	P	A	Q	T	S	A	E	D	V	L	K	M	N	P	D	G	I	F	L	S	N	G	P	G	D	P	A	P	C	D	Y	A	I	.	.	.	.	.	T	A	I	Q	K	F	L	E	T	D	I	P	V	F
Query Conservation									.																																																						.	.	.	.	.
Alig confidence									.																												.	.	.	.	.																						.	.	.	.	.
Template Conservation																																					.	.	.	.	.
Template Sequence		V	V	G	V	L	A	L	Q	G	D	F	R	E	H	K	E	A	L	K	R	L	G	I	E	A	K	E	V	R	K	K	E	H	L	E	.	.	.	.	.	G	L	K	A	L	I	V	P	G	G	E	S	T	T	I	G	K	L	A	R	E	Y	G	I	E	D	E	V	R	K	R	V	E	E	G	S	L	A	L	F
Template Known Secondary structure								S	S	S											T	T	T								S	G	G	G	G	T	.	.	.	.	.	T		S						S	S												T	T											T	T
Template Predicted Secondary structure																																					.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.						.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.													.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.																								.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.																								.
Query Sequence		G	I	C	L	G	H	Q	L	L	A	L	A	S	G	A	K	.	.	.	.	.	.	.	.	.	.	.	.	T	V	K	M	K	F	G	H	H	G	G	N	H	P	V	K	D	V	E	K	N	V	V	.	M	I	T	A	Q	N	H	G	F	A	V	D	E	A	T	L	P	A	N	L	R	V	T	H	K	S	L	F
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.																								.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.																								.														.	.												.	.
Template Conservation																																																																			.	.												.	.
Template Sequence		G	T	C	A	G	A	I	W	L	A	K	E	I	V	G	Y	P	E	Q	P	R	L	G	V	L	E	A	W	V	E	R	N	A	F	G	R	Q	V	E	S	F	E	E	D	L	E	V	E	G	L	G	S	F	H	G	V	F	I	R	A	P	V	F	R	R	.	.	L	G	E	G	V	E	V	L	A	R	L	.	.
Template Known Secondary structure				T											T	T		T	T													T	T		S			S	S	S									T	T	T									S							.	.			T	T								.	.
Template Predicted Secondary structure																																																																			.	.												.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	T	L	Q	G	I	H	R	T	D	K	P	A	F	S	F	Q	G	H	P	E	A	S	P	G	P	H	D	A	A	P	L	F	D	H	F	I	E	L	I
Query Conservation
Alig confidence												.	.																	.	.	.	.
Template Conservation												.	.																	.	.	.	.
Template Sequence		G	D	L	P	V	L	V	R	Q	G	.	.	K	V	L	A	S	S	F	H	P	E	L	T	E	D	P	R	.	.	.	.	L	H	R	Y	F	L	E	L	A
Template Known Secondary structure		T	T								T	.	.	T					S	S		G	G	G	S	S				.	.	.	.
Template Predicted Secondary structure												.	.																	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180					.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions