Job Description P0A6F1 Confidence 99.96% Date Thu Jan 5 11:02:59 GMT 2012 Rank 27 Aligned Residues 187 % Identity 24% Template c2w7tA_ PDB info PDB header:ligase Chain: A: PDB Molecule:putative cytidine triphosphate synthase; PDBTitle: trypanosoma brucei ctps - glutaminase domain with bound2 acivicin Resolution 2.10 Å

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		193	.	.	.	.						.	.	200	.	.	.		.	.	.	.	.	.					210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.							.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure							.	.	.	.	.							.							.	.	.	.																	.	.	.	.	.	.							.	.
Query SS confidence							.	.	.	.	.							.							.	.	.	.																	.	.	.	.	.	.							.	.
Query Sequence		H	V	V	A	Y	.	.	.	.	.	D	F	G	A	K	R	.	N	I	L	R	M	L	.	.	.	.	V	D	R	G	C	R	L	T	I	V	P	A	Q	T	S	A	.	.	.	.	.	.	E	D	V	L	K	M	.	.	N	P	D	G	I	F	L	S	N	G	P	G	D	P	A	P	C	D	Y	A	I	T	A
Query Conservation							.	.	.	.	.							.							.	.	.	.																	.	.	.	.	.	.							.	.
Alig confidence							.	.	.	.	.							.							.	.	.	.																	.	.	.	.	.	.							.	.															.
Template Conservation																																																																									.
Template Sequence		R	I	A	F	V	G	K	Y	L	Q	D	A	G	D	T	Y	F	S	V	L	Q	C	F	E	H	C	Q	I	A	L	Q	V	R	L	D	I	L	Y	V	D	S	E	E	L	E	G	P	N	A	D	E	A	R	K	A	L	L	G	C	D	G	I	F	V	P	G	G	F	G	N	R	.	G	V	D	G	K	C	A	A
Template Known Secondary structure														T	T	T	T															T										G	G	G	G	S	S	T	T	T									T		S									T	T	T	.	T
Template Predicted Secondary structure																																																																									.
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.		.	.	.	400	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.																													.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Query Sequence		I	Q	K	F	L	E	T	D	I	P	V	F	G	I	C	L	G	H	Q	L	L	A	L	A	S	G	A	K	T	V	K	M	K	F	G	H	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	N	H	P	V	K	D	.	.	.	.	.	.	.
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Alig confidence																	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Template Conservation																	.
Template Sequence		A	Q	V	A	R	M	N	N	I	P	Y	F	G	V	L	.	G	M	Q	V	A	V	I	E	L	S	R	N	V	V	G	W	S	D	A	N	S	E	E	F	N	K	E	S	T	H	Q	V	V	R	I	M	D	C	D	R	N	K	M	G	A	N	M	H	L	G	A	C	D	V	Y	I	V	E	K	S	S	I	M	A
Template Known Secondary structure									T								.													T	T			T	T				T	T	T		T	T		S								G	G	G	B		S	S		B														T	T	S
Template Predicted Secondary structure																	.
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
				300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.					.	.	.	.	.	.	.	330	.	.					.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																								.	.	.	.											.	.	.	.																	.
Query SS confidence		.	.																								.	.	.	.											.	.	.	.																	.
Query Sequence		.	.	V	E	K	N	V	V	M	I	T	A	Q	N	H	G	F	A	V	D	E	A	T	L	P	.	.	.	.	A	N	L	R	V	T	H	K	S	L	.	.	.	.	F	D	G	T	L	Q	G	I	H	R	T	D	K	P	A	F	.	S	F	Q	G	H	P	E	A	S	P	G	P	H	D	A	A	P	L	F	D
Query Conservation		.	.																								.	.	.	.											.	.	.	.																	.
Alig confidence		.	.																								.	.	.	.											.	.	.	.																	.
Template Conservation
Template Sequence		K	I	Y	S	K	S	N	I	V	V	E	R	H	R	H	R	Y	E	V	N	T	A	Y	F	E	D	L	R	K	A	G	L	C	I	S	A	V	T	D	P	T	F	S	S	R	C	R	V	E	A	V	E	N	P	S	L	R	F	F	L	A	V	Q	F	H	P	E	F	I	S	T	P	M	D	P	A	P	T	Y	L
Template Known Secondary structure				T	T	T		S														G	G	G							T	T							S		T	T			T	T									T	T	S	S	S					S	S		G	G	G	S		B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
		369	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	F	I	E	L	I	E	Q	Y	R	K	T	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	F	M	A	A	A	A	K	K	D	Y	V	W
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		565	.	.	.	.	570	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions