Job Description P0A6F1 Confidence 40.12% Date Thu Jan 5 11:02:59 GMT 2012 Rank 318 Aligned Residues 73 % Identity 22% Template c2vk2A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:abc transporter periplasmic-binding protein ytfq; PDBTitle: crystal structure of a galactofuranose binding protein Resolution 1.20 Å

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		191	.	.	.	.	.	.	.	.	200	.	.									.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.								.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Query Sequence		P	F	H	V	V	A	Y	D	F	G	A	K	.	.	.	.	.	.	.	.	R	N	I	L	R	M	L	V	D	R	G	C	R	L	T	I	V	P	A	Q	T	S	.	.	.	.	.	.	.	A	E	D	V	L	K	M	N	P	D	G	I	F	L	S	N	G	P	G	D	P	A	P	C	D	Y	A	I	T	A	I
Query Conservation														.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.
Template Sequence		P	L	T	V	G	F	S	Q	V	G	S	E	S	G	W	R	A	A	E	T	N	V	A	K	S	E	A	E	K	R	G	I	T	L	K	I	A	D	G	Q	Q	K	Q	E	N	Q	I	K	A	V	R	S	F	V	A	Q	G	V	D	A	I	F	I	A	P	V	V	A	.	.	.	.	.	T	G	W	E	P	V	L
Template Known Secondary structure														S																		T									T	T																T		S							S	S	S	.	.	.	.	.	S	S
Template Predicted Secondary structure																																																																						.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.						70	.	.	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	F	L	E	T	D	I	P	V	F	G	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	A	K	D	A	E	I	P	V	F	L	L
Template Known Secondary structure							T	T
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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