Job Description P0A6F1 Confidence 99.95% Date Thu Jan 5 11:02:59 GMT 2012 Rank 32 Aligned Residues 167 % Identity 18% Template c2issF_ PDB info PDB header:lyase, transferase Chain: F: PDB Molecule:glutamine amidotransferase subunit pdxt; PDBTitle: structure of the plp synthase holoenzyme from thermotoga maritima Resolution 2.90 Å

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		193	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250					.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure									.																																																				.	.	.	.
Query SS confidence									.																																																				.	.	.	.
Query Sequence		H	V	V	A	Y	D	F	.	G	A	K	R	N	I	L	R	M	L	V	D	R	G	C	R	L	T	I	V	P	A	Q	T	S	A	E	D	V	L	K	M	N	P	D	G	I	F	L	S	N	G	P	G	D	P	A	P	C	D	Y	.	.	.	.	A	I	T	A	I	Q	K	F	L	E	T	D	I	P	V	F	G
Query Conservation									.																																																				.	.	.	.
Alig confidence									.																												.	.	.	.	.																				.	.	.	.
Template Conservation																																					.	.	.	.	.
Template Sequence		K	I	G	V	L	G	V	Q	G	D	V	R	E	H	V	E	A	L	H	K	L	G	V	E	T	L	I	V	K	L	P	E	Q	L	D	.	.	.	.	.	M	V	D	G	L	I	L	P	G	G	E	S	T	T	M	I	R	I	L	K	E	M	D	M	D	E	K	L	V	E	R	I	N	N	G	L	P	V	F	A
Template Known Secondary structure								S	S	S												T	T								S	G	G	G	G	G	.	.	.	.	.	G		S						S	S												T	T											T	T
Template Predicted Secondary structure																																					.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.						.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280									.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.				.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.																								.	.	.
Query SS confidence															.	.	.	.	.	.	.	.																								.	.	.
Query Sequence		I	C	L	G	H	Q	L	L	A	L	A	S	G	.	.	.	.	.	.	.	.	A	K	T	V	K	M	K	F	G	H	H	G	G	N	H	P	V	K	D	V	E	K	N	.	.	.	V	V	M	I	T	A	Q	N	H	G	F	A	V	D	E	A	T	L	P	A	N	L	R	V	T	H	K	S	L	F	D	G	T
Query Conservation															.	.	.	.	.	.	.	.																								.	.	.
Alig confidence															.	.	.	.	.	.	.	.																								.	.	.																.	.												.	.
Template Conservation																																																																.	.												.	.
Template Sequence		T	C	A	G	V	I	L	L	A	K	R	I	K	Q	E	K	L	G	V	L	D	I	T	V	E	R	N	A	Y	G	R	Q	V	E	S	F	E	T	F	V	E	I	P	A	V	G	K	D	P	F	R	A	I	F	I	R	A	P	R	I	V	E	.	.	T	G	K	N	V	E	I	L	A	T	Y	.	.	D	Y	D
Template Known Secondary structure			T																								T	T	T	T		S	G	G	G									G	G	G		S	S							S	S							.	.			S	S								.	.	T	T
Template Predicted Secondary structure																																																																.	.												.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.			150	.	.
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	G	I	H	R	T	D	K	P	A	F	S	F	Q	G	H	P	E	A	S	P	G	P	H	D	A	A	P	L	F	D	H	F	I	E	L	I
Query Conservation
Alig confidence							.	.																			.	.	.	.
Template Conservation							.	.																			.	.	.	.
Template Sequence		P	V	L	V	K	.	.	E	G	N	I	L	A	C	T	F	H	P	E	L	T	D	D	L	R	.	.	.	.	L	H	R	Y	F	L	E	M	V
Template Known Secondary structure							.	.		T	T					S	S		G	G	G	S	S				.	.	.	.							T	T
Template Predicted Secondary structure							.	.																			.	.	.	.
Template SS confidence
		156	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.					.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions