Job Description P0A6F1 Confidence 99.75% Date Thu Jan 5 11:02:59 GMT 2012 Rank 43 Aligned Residues 176 % Identity 14% Template c2h2wA_ PDB info PDB header:transferase Chain: A: PDB Molecule:homoserine o-succinyltransferase; PDBTitle: crystal structure of homoserine o-succinyltransferase (ec 2.3.1.46)2 (homoserine o-transsuccinylase) (hts) (tm0881) from thermotoga3 maritima at 2.52 a resolution Resolution 2.52 Å

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		190	.	.	.	.	.	.	.	.	.	200	.	.	.						.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.									220	.	.	.	.	.	.	.	.	.	230	.											.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.																	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.																	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	F	H	V	V	A	Y	D	F	G	A	K	R	.	.	.	.	.	N	I	L	R	M	L	V	D	R	G	C	R	L	T	I	V	.	.	.	.	.	.	.	.	P	A	Q	T	S	A	E	D	V	L	K	M	.	.	.	.	.	.	.	.	.	.	N	P	D	G	I	F	L	S	N	G	P	G	D	P	A
Query Conservation																.	.	.	.	.																	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.																	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	P	L	E	I	L	I	L	N	L	M	P	D	K	I	K	T	E	I	Q	L	L	R	L	L	G	N	T	P	L	Q	V	N	V	T	L	L	Y	T	E	T	H	K	P	K	H	T	P	I	E	H	I	L	K	F	Y	T	T	F	S	A	V	K	D	R	K	F	D	G	F	I	I	T	G	A	P	V	E	L	L
Template Known Secondary structure													S	S														S	S	S	S										S						S	S										B		G	G	G	T	T	T												S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		247	.	.	250							.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.								.	.	.	.	.			.	310	.
Predicted Secondary structure						.	.	.	.	.	.																																																						.	.	.	.	.	.	.						.	.
Query SS confidence						.	.	.	.	.	.																																																						.	.	.	.	.	.	.						.	.
Query Sequence		P	C	D	Y	.	.	.	.	.	.	A	I	T	A	I	Q	K	F	L	E	T	D	I	P	V	F	G	I	C	L	G	H	Q	L	L	A	L	A	S	G	A	K	T	V	K	M	K	F	G	H	H	G	G	N	H	P	V	K	D	V	E	K	N	.	.	.	.	.	.	.	V	V	M	I	T	.	.	A	Q	N
Query Conservation						.	.	.	.	.	.																																																						.	.	.	.	.	.	.						.	.
Alig confidence						.	.	.	.	.	.																																																						.	.	.	.	.	.	.						.	.
Template Conservation
Template Sequence		P	F	E	E	V	D	Y	W	E	E	L	T	E	I	M	E	W	S	R	H	N	V	Y	S	T	M	F	I	C	W	A	A	Q	A	G	L	Y	Y	F	Y	G	I	P	K	Y	E	L	P	Q	K	L	S	G	V	Y	K	H	R	V	A	K	D	S	V	L	F	R	G	H	D	D	F	F	W	A	P	H	S	R	Y
Template Known Secondary structure			G	G	G	S	T	T																						T																															S	S			G	G	G	T	T			S
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	F	A	V	D	E	A	T	L	P	A	N	L	R	V	T	H	K	S	L	F	D	G	T	L	Q	G	I	H	R	T	D	K	P	A	F	S	F	Q	G	H	P	E	A	S	P	G	P	H	D	A	A	P	L
Query Conservation
Alig confidence																										.
Template Conservation																										.
Template Sequence		T	E	V	K	K	E	D	I	D	K	V	P	E	L	E	I	L	A	E	S	D	E	A	G	.	V	Y	V	V	A	N	K	S	E	R	Q	I	F	V	T	G	H	P	E	Y	D	R	Y	T	L	R	D	E	Y	Y
Template Known Secondary structure										T	T		T	T								T	T	T		.							S	S	S	S						S		T	T			T	T
Template Predicted Secondary structure																										.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions