Job Description P0A6F1 Confidence 48.77% Date Thu Jan 5 11:02:59 GMT 2012 Rank 260 Aligned Residues 78 % Identity 18% Template c2fu3A_ PDB info PDB header:biosynthetic protein/structural protein Chain: A: PDB Molecule:gephyrin; PDBTitle: crystal structure of gephyrin e-domain Resolution 2.70 Å

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		190	.	.	.	.	.	.	.	.	.	200	.																			.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.							.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.											.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.											.	.	.	.	.	.
Query Sequence		L	P	F	H	V	V	A	Y	D	F	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	R	N	I	L	R	M	L	V	D	R	G	C	R	L	T	I	V	P	A	.	Q	T	S	A	E	D	V	L	K	M	.	.	.	.	.	.	N	P	D	G	I	F	L	S	N	G	P	G	D
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.											.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.											.	.	.	.	.	.													.
Template Conservation																																																																																	.
Template Sequence		K	F	P	V	V	A	V	M	S	T	G	N	E	L	L	N	P	E	D	D	L	L	P	G	K	I	R	D	S	N	R	S	T	L	L	A	T	I	Q	E	H	G	Y	P	T	I	N	L	G	I	V	G	D	N	P	D	D	L	L	N	A	L	N	E	G	I	S	R	A	D	V	I	I	T	S	G	G	V	S	.
Template Known Secondary structure													T	T				T	T	S				T	T																	T	T											S																	S						S			S	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		497	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	P	C	D	Y	A	I	T	A	I	Q	K	F	L	E	T	D	I	P	V	F	G	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	G	E	K	D	Y	L	K	Q	V	L	D	I	D	L	H	A	Q	I	H	F	G	R	V
Template Known Secondary structure		S	S	S	T										T	T							S
Template Predicted Secondary structure
Template SS confidence
		576	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions