Job Description P0A6F1 Confidence 34.25% Date Thu Jan 5 11:02:59 GMT 2012 Rank 357 Aligned Residues 122 % Identity 22% Template c2ekcA_ PDB info PDB header:lyase Chain: A: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: structural study of project id aq_1548 from aquifex aeolicus vf5 Resolution 2.00 Å

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		52	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure												.																																														.	.	.
Query SS confidence												.																																														.	.	.
Query Sequence		I	V	T	L	T	Y	P	H	I	G	.	N	V	G	T	N	D	A	D	E	E	S	S	Q	V	H	A	Q	G	L	V	I	R	D	L	P	L	I	A	S	N	F	R	N	T	E	D	L	S	S	Y	L	K	R	H	N	.	.	.	I	V	A	I	A	D	I	D	T	R	K	L	T	R	L	L	R	E	K	G	A
Query Conservation												.																																														.	.	.
Alig confidence												.																										.	.	.	.	.																.	.	.
Template Conservation																																						.	.	.	.	.
Template Sequence		F	L	L	M	T	Y	Y	N	P	I	F	R	I	G	L	E	K	F	C	R	L	S	R	E	K	G	I	D	G	F	I	V	P	D	L	P	.	.	.	.	.	P	E	E	A	E	E	L	K	A	V	M	K	K	Y	V	L	S	F	V	P	L	G	A	P	T	S	T	R	K	R	I	K	L	I	C	E	A	A	D
Template Known Secondary structure																										T	T							T	T			.	.	.	.	.														T	T									T	T														S
Template Predicted Secondary structure																																						.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
			128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.
Predicted Secondary structure		.																																																																													.
Query SS confidence		.																																																																													.
Query Sequence		.	Q	N	G	C	I	I	A	G	D	N	P	D	A	A	L	A	L	E	K	A	R	A	F	P	G	L	N	G	M	D	L	A	K	E	V	T	T	A	E	A	Y	S	W	T	Q	G	S	W	T	L	T	G	G	L	P	E	A	K	K	E	D	E	L	P	F	H	V	V	A	Y	D	F	G	A	K	R	.	N	I
Query Conservation		.																																																																													.
Alig confidence		.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	M	T	Y	F	V	S	V	T	G	Y	E	R	I	K	K	K	V	E	E	Y	R	E	L	C	D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	V	V	G	F	G	V	S	K	K	E	H
Template Known Secondary structure		S						S	S																			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S			S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.																																									.	200	.	.	.	.	.	.	.	.	.	210	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	M	L	V	D	R	G	C	R	L	T	I	V
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		A	R	E	I	G	S	.	F	A	D	G	V	V	V
Template Known Secondary structure							T	.	T	S	S
Template Predicted Secondary structure								.
Template SS confidence
		221	.	.	.	.	.		.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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