 |
Job Description | P0A6F1 | Confidence | 32.84% | Date | Thu Jan 5 11:02:59 GMT 2012 |
Rank | 372 | Aligned Residues | 61 |
% Identity | 20% | Template | c2ashB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:queuine trna-ribosyltransferase; |
PDBTitle: crystal structure of queuine trna-ribosyltransferase (ec 2.4.2.29)2 (trna-guanine (tm1561) from thermotoga maritima at 1.90 a resolution
|
Resolution | 1.90 Å |
|
 |
  |   |
224 | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | |
. | . | . | . | . | |
. | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | |
|
. | . | . | . | . | 270 | . | . | . | . | . | |
. | . | . | . | 280 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . |
|
|
|
|  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . |  |  |  |  |
|  |  |  |  |  |  | . |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | A | E | D | V | L | K | M | N | P | D | G | I | F | L | S | N | . |
G | P | G | D | P | . |
A | P | C | D | Y | A | I | T | A | I | Q | K | F | L | E | T | D | I | P | . |
. |
V | F | G | I | C | L | G | H | Q | L | L | . |
A | L | A | S | G | A | K | T | V |
Query Conservation |   |
  |   |
|   |
|   |   |   |   |
|
|
|
|
|
|
|   | . |
|
|
|
|
| . |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|
| . | . |
|
|
|
|
|
|
|   |
|
|
| . |
|   |
|   |
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|
|
|   |
|   |
|   |
|   |
|   |   |
|
|   |   |
|   |   |
|
|
|   |
|
Template Sequence |   |
S | A | L | Q | L | T | S | I | G | F | D | G | Y | A | I | G | G | L | S | I | G | E | E | R | S | L | T | L | E | M | T | E | V | T | V | E | F | L | P | E | D | K | P | R | Y | F | M | G | G | G | S | P | E | L | I | L | E | L | V | D | R | G | V | D | M | F |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
|
| S |  |  |  |  |
| S |
| S | S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
| T | T | S |
|  |  |  |
| S |
|
|
|  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
195 | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|