Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6F1
Confidence28.83%DateThu Jan 5 11:02:59 GMT 2012
Rank412Aligned Residues80
% Identity15%Templatec1w2wJ_
PDB info PDB header:isomeraseChain: J: PDB Molecule:5-methylthioribose-1-phosphate isomerase; PDBTitle: crystal structure of yeast ypr118w, a methylthioribose-1-2 phosphate isomerase related to regulatory eif2b subunits
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   189190........ .200..... ....210.........220.........230. ........240 .........250.......
Predicted Secondary structure 



...



.








...




....



Query SS confidence 









. . .






.

























. . .








. . . .
















Query Sequence  ELPFHVVAYD. . . FGAKRNI. LRMLVDRGCRLTIVPAQTSAEDVLKM. . . NPDGIFLSN. . . . GPGDPAPCDYAITAIQK
Query Conservation       
 


... 
 
 

. 
 
   
  
 


     
 
   ... 






 ....




      
  

 
Alig confidence 









...






.














.









...








....
















Template Conservation   
   
 
 



  

  
 
  
   

 



 .



   
      

 







  

 
 

 

  


 
Template Sequence  PRXGHVFPLETRPYNQGSRLTAYELVYDKIPSTLIT. DSSIAYRIRTSPIPIKAAFVGADRIVRNGDTANKIGTLQLAVI
Template Known Secondary structure 




B

B

TTTTTT

B

B
.GGG
SS




S
TT

TT
Template Predicted Secondary structure 












.










Template SS confidence 















































































   222.......230.........240.........250....... ..260.........270.........280.........290.........300
 
   258.260.........
Predicted Secondary structure 




Query SS confidence 











Query Sequence  FLETDIPVFGIC
Query Conservation   
   






Alig confidence 











Template Conservation 

   


 
 
Template Sequence  CKQFGIKFFVVA
Template Known Secondary structure  T

Template Predicted Secondary structure 




Template SS confidence 











   301........310..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions