Job Description P0A6F1 Confidence 35.82% Date Thu Jan 5 11:02:59 GMT 2012 Rank 345 Aligned Residues 151 % Identity 17% Template c1jcgA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:rod shape-determining protein mreb; PDBTitle: mreb from thermotoga maritima, amppnp Resolution 3.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.				.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																																	.	.	.			.	.	.
Query SS confidence																																																	.	.	.			.	.	.
Query Sequence		M	I	K	S	A	L	L	V	L	E	D	G	T	Q	F	H	G	R	A	I	G	A	T	G	S	A	V	G	E	V	V	F	N	T	S	M	T	G	Y	Q	E	I	L	T	D	P	S	.	.	.	Y	S	.	.	.	R	Q	I	V	T	L	T	Y	P	H	I	G	N	V	G	T	N	D	A	D	E	E	S	S	Q
Query Conservation																																																	.	.	.			.	.	.
Alig confidence						.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.			.	.	.
Template Conservation						.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	L	R	K	.	D	I	G	I	D	L	G	T	A	N	T	L	V	F	L	R	G	K	G	I	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	P	S	V	I	A	I	D	S	T	T	G	E	I	L	K	V	G	L	E	A	K	N	M	I	G	K	T	P	A	T	I	K	A	I	R
Template Known Secondary structure				S		.								S	S							T	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S						T	T	T							S					T	T	T	T	S			T	T
Template Predicted Secondary structure						.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.		.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.																	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	H	A	Q	G	L	V	I	R	D	L	P	L	I	A	S	N	F	R	N	T	E	D	L	S	S	Y	L	K	R	H	N	I	V	A	I	A	D	I	D	T	R	K	L	T	R	L	L	R	E	K	G	A	Q	N	G	C	I	I	A	G	D	N	P	D	A	A	L	A	L	E	K	A	R	A	F	P	G	L	N
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	M	R	D	G	V	I	.	.	.	.	.	.	.	.	A	D	Y	T	V	A	L	V	M	L	R	Y	F	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	K	G	G	M	N	L	F	K	P	R	V	V	I	G	V	P	I	G	I	T	D	V	E	R	R	A	I	L	D	A	G	L	E	A
Template Known Secondary structure					T	T			.	.	.	.	.	.	.	.	S	S														.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	S			S	S										S	S															T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70									.	.	.	.	.	.	.	.	.	80	.	.	.	.	.															.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	D	L	A	K	E	V	T	T	A	E	A	Y	S	W	T	Q	G	S	W	T	L	T	G	G	L	P	E	A	K	K	E	D	E	L	P	F	H	V	V	A	Y	D	F	G	A	K
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	S	K	V	F	L	I	E	E	P	M	A	A	A	I	G	S	N	.	.	.	.	.	.	.	.	.	.	.	.	L	N	V	E	E	P	S	G	N	M	V	V	D	I	G	G	G
Template Known Secondary structure		T		S														T	T	T	.	.	.	.	.	.	.	.	.	.	.	.			S	S	S	S	S									S	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140													.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions