Job Description P77699 Confidence 24.86% Date Thu Jan 5 12:31:48 GMT 2012 Rank 166 Aligned Residues 66 % Identity 8% Template c2wjyA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:regulator of nonsense transcripts 1; PDBTitle: crystal structure of the complex between human nonsense2 mediated decay factors upf1 and upf2 orthorhombic form Resolution 2.50 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.
Predicted Secondary structure																																																																.	.
Query SS confidence																																																																.	.
Query Sequence		K	E	S	A	Y	Q	E	G	R	W	E	T	L	P	F	Q	R	A	I	M	N	A	M	G	S	D	Y	I	R	E	V	N	V	V	K	S	A	R	V	G	Y	S	K	M	L	L	G	V	Y	A	Y	F	I	E	H	K	Q	R	N	T	L	I	.	.	P	A	G	F	V	A
Query Conservation																																																																.	.
Alig confidence																													.	.																																		.	.
Template Conservation																													.	.
Template Sequence		P	K	R	F	T	A	Q	G	L	P	D	L	N	H	S	Q	V	Y	A	V	K	T	V	L	Q	R	P	.	.	L	S	L	I	Q	G	P	P	G	T	G	K	T	V	T	S	A	T	I	V	Y	H	L	A	R	Q	G	N	G	P	V	L	V	C	A	P	S	N	I	A	V
Template Known Secondary structure			S			S		T	T	S																T	S	S	.	.								T	T	S															T	T		S	S							S	S
Template Predicted Secondary structure																													.	.
Template SS confidence
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.			.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions