Job Description P77699 Confidence 49.76% Date Thu Jan 5 12:31:48 GMT 2012 Rank 47 Aligned Residues 77 % Identity 18% Template c2b92A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:interferon-induced guanylate-binding protein 1; PDBTitle: crystal-structure of the n-terminal large gtpase domain of human2 guanylate binding protein 1 (hgbp1) in complex with gdp/alf3 Resolution 3.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																																																									.	.				.	.	.
Query SS confidence																																																									.	.				.	.	.
Query Sequence		G	R	W	E	T	L	P	F	Q	R	A	I	M	N	A	M	G	S	D	Y	I	R	E	V	N	V	V	K	S	A	R	V	G	Y	S	K	M	L	L	G	V	Y	A	Y	F	I	E	H	K	Q	R	N	T	L	I	.	.	P	A	G	.	.	.	F	V	A	V	F	N	S	D	E	S	S	W	H	L	V	E	D
Query Conservation																																																									.	.				.	.	.
Alig confidence																					.																																				.	.				.	.	.
Template Conservation																					.
Template Sequence		G	R	L	M	A	N	P	E	A	L	K	I	L	S	A	I	T	Q	P	.	M	V	V	V	A	I	V	G	L	Y	R	T	G	K	S	Y	L	M	N	K	L	A	G	K	K	K	G	F	S	L	G	S	T	V	Q	S	H	T	K	G	I	W	M	W	C	V	P	H	P	K	K	P	G	H	I	L	V	L	L	D
Template Known Secondary structure		T													T	T			S	B	.									B	S	S	S	S									T	T		S	S	S	S					S	S	S					S									S	S	S	T	T
Template Predicted Secondary structure																					.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		124	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	E	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		98	.	100

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions