Job Description P77699 Confidence 34.59% Date Thu Jan 5 12:31:48 GMT 2012 Rank 103 Aligned Residues 53 % Identity 11% Template c1sxjE_ PDB info PDB header:replication Chain: E: PDB Molecule:activator 1 40 kda subunit; PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna) Resolution 2.85 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		W	A	D	A	N	Y	Y	L	P	K	E	S	A	Y	Q	E	G	R	W	E	T	L	P	F	Q	R	A	I	M	N	A	M	G	.	S	D	Y	I	R	E	V	N	V	V	K	S	A	R	V	G	Y	S	K	M	L	L	G	V	Y
Query Conservation																																			.
Alig confidence								.	.															.	.	.									.
Template Conservation								.	.															.	.	.
Template Sequence		W	V	D	K	Y	R	.	.	P	K	S	L	N	A	L	S	H	N	E	E	L	T	.	.	.	N	F	L	K	S	L	S	D	Q	P	R	D	L	P	H	L	L	L	Y	G	P	N	G	T	G	K	K	T	R	C	M	A	L	L
Template Known Secondary structure			T	T	T	T		.	.			S	G	G	G			S						.	.	.					T	T	T	T		T	T										S	T	T	S	S							T
Template Predicted Secondary structure								.	.															.	.	.
Template SS confidence
		4	.	.	.	.	.			10	.	.	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions