Job Description P77699 Confidence 45.81% Date Thu Jan 5 12:31:48 GMT 2012 Rank 59 Aligned Residues 56 % Identity 11% Template c1sxjD_ PDB info PDB header:replication Chain: D: PDB Molecule:activator 1 41 kda subunit; PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna) Resolution 2.85 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	A	D	A	N	Y	Y	L	P	K	E	S	A	Y	Q	E	G	R	W	E	T	L	P	F	Q	R	A	I	M	N	A	M	G	S	D	Y	I	R	E	V	N	V	V	K	S	A	R	V	G	Y	S	K	M	L	L	G	V	Y	A	Y	F
Query Conservation
Alig confidence								.	.													.	.	.
Template Conservation								.	.													.	.	.
Template Sequence		W	V	E	K	Y	R	.	.	P	K	N	L	D	E	V	T	A	Q	D	H	.	.	.	A	V	T	V	L	K	K	T	L	K	S	A	N	L	P	H	M	L	F	Y	G	P	P	G	T	G	K	T	S	T	I	L	A	L	T	K	E	L
Template Known Secondary structure						T		.	.		S	S	T	T	T			S			T	.	.	.	T								T	T		T	T									S	T	T	S	S
Template Predicted Secondary structure								.	.													.	.	.
Template SS confidence
		27	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions