Job Description P77699 Confidence 54.44% Date Thu Jan 5 12:31:48 GMT 2012 Rank 39 Aligned Residues 56 % Identity 7% Template c1sxjC_ PDB info PDB header:replication Chain: C: PDB Molecule:activator 1 40 kda subunit; PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna) Resolution 2.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	A	D	A	N	Y	Y	L	P	K	E	S	A	Y	Q	E	G	R	W	E	T	L	P	F	Q	R	A	I	M	N	A	M	G	S	D	Y	I	R	E	V	N	V	V	K	S	A	R	V	G	Y	S	K	M	L	L	G	V	Y	A	Y	F
Query Conservation
Alig confidence								.	.											.	.	.
Template Conservation								.	.											.	.	.
Template Sequence		W	V	E	K	Y	R	.	.	P	E	T	L	D	E	V	Y	G	Q	.	.	.	N	E	V	I	T	T	V	R	K	F	V	D	E	G	K	L	P	H	L	L	F	Y	G	P	P	G	T	G	K	T	S	T	I	V	A	L	A	R	E	I
Template Known Secondary structure						T		.	.		S	S	G	G	G			S		.	.	.													T	T										S	S	S	S	S
Template Predicted Secondary structure								.	.											.	.	.
Template SS confidence
		15	.	.	.	.	20			.	.	.	.	.	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions