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Job DescriptionP42640
Confidence99.90%DateThu Jan 5 12:02:01 GMT 2012
Rank19Aligned Residues251
% Identity14%Templatec3szzA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:phosphonoacetate hydrolase; PDBTitle: crystal structure of phosphonoacetate hydrolase from sinorhizobium2 meliloti 1021 in complex with acetate
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   214.....220.........230.........240.........250.........260.........270.........280.........290...
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Query Sequence  QLSVRDTGIDTYVLIVGESVRVDNMSLYGYTRSTTPQVEAQRKQIKLFNQAISGAPYTALSVPLSLTADSVLSHDIHNYP
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Template Sequence  NGRRYPWPRVPAIAVCLDGCEPAYLDAAIDA. GLMPALKRIKERGAVRLAHSVIPSFTNPNNLSIATGSPPAVHGICGNY
Template Known Secondary structure  TT

SS

TT

T.T

S

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TS



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   12.......20.........30.........40.. .......50.........60.........70.........80.........90
 
   294.....300.........310.... .....320....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . DNIINMANQAGFQTFWLSSQS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . AFRQNGTAVT
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Template Sequence  LYEPSTGEEVMMNDPKFLRAPTIFQAFYDAGARVAVVTAKDKLRALLGKGLRFDEGRAVCFSSEKSDKATRAEHGIDNAS
Template Known Secondary structure  TTTT

SGGG

S

TT

SSTTT


SSS
STTGGG

SSS
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   91........100.........110.........120.........130.........140.........150.........160.........170
 
   325....330.........340.........350.........360.........370.........380.........390.........400....
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Query Sequence  SIAMRAMETVYVRGFDELLLPHLSQALQQNTQQKKLIVLHLNGSHEPACSAYPQSSAVFQPQDDQDACYDNSIHYTDSLL
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Template Sequence  AWLGRPVPEVYSAALSEFVFAAGVKLLRE. . FRPDIMYLTTTDYVQHKYAPGVPE. . . . . . . . . . . . . ANSFYEMFDRYL
Template Known Secondary structure  T




SSSS..T

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   171........180.........190......... 200.........210.........220... ......230.....
 
   405....410
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Query Sequence  GQVFEL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  AELDGLGAAIVVTADHGMKPKHKADGSPDVIYVQDLLDEWLGKDAARVILPITDPYVVHHGALGSFATAYLPDGCDRSEI
Template Known Secondary structure  TT

S



B
TTSSB

TTSS
TTS
TT

SSTT
BS

TTS
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   236...240.........250.........260.........270.........280.........290.........300.........310.....
 
   411.. .... ..420.........430.........440... ......450.........460
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Query Sequence  . . . . . . . . . . . . . . . . . . . LKD. . . . RRAS. . VMYFADHGLERDPTKKNVYFHGGREA. . . . . SQQAYHVPMFIWYSPVL
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Template Sequence  MARLKAIQGVDVVLGREEACRRFELPEDRIGDIVLVSSENKTLGTSEHRHDLAALDEPLRSHGGLTEQEVPFIVNRVLPE
Template Known Secondary structure  TSTTT

GGGS
S
TT


SSS





SS



SGGG
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TT
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   316...320.........330.........340.........350.........360.........370.........380.........390.....
 
   461........470.........480...
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Query Sequence  GDGVDRTTENNIFSTAYNNYLIN
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Template Sequence  LPN. . . APRLRNFDAFFYAVTAA
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...TTTSBGGG
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   396.. .400.........410.....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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