Job Description P42640 Confidence 100.00% Date Thu Jan 5 12:02:01 GMT 2012 Rank 7 Aligned Residues 325 % Identity 14% Template c3lxqB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein vp1736; PDBTitle: the crystal structure of a protein in the alkaline2 phosphatase superfamily from vibrio parahaemolyticus to3 1.95a Resolution 1.95 Å

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		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	S	R	F	A	T	Y	T	P	F	F	N	L	N	Y	F	A	L	A	A	K	E	H	Q	R	L	L	S	I	A	N	T	V	P	Y	F	Q	L	S	V	R	D	T	G	I	D	T	Y	V	L	I	V	G	E	S	V	R	V	D	N	M	S	L	Y	G	Y	T	R	S	T	T	P	Q	V	E	A	Q	R	K
Query Conservation
Alig confidence																																																																								.
Template Conservation																																																																								.
Template Sequence		S	A	E	Q	F	Y	G	K	X	D	N	Q	K	X	L	D	L	V	R	A	S	S	T	K	I	D	F	D	P	T	L	L	P	T	X	N	S	N	P	A	T	Y	Q	G	K	R	K	N	L	V	I	L	L	Q	E	S	L	G	A	Q	F	V	G	S	L	G	G	L	P	L	.	T	P	N	L	D	E	L	X	Q
Template Known Secondary structure																										S		B		T	T	T	S	T	T							S			S	S										T	T			G	G	G		G	G	G	T	S		S		.									T
Template Predicted Secondary structure																																																																								.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.								.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.											.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	I	K	L	F	N	Q	A	I	S	G	A	P	Y	T	A	L	S	V	P	L	S	L	T	A	D	S	V	L	S	H	D	I	H	N	Y	P	.	.	.	.	.	.	.	D	N	I	I	N	M	A	N	Q	A	G	F	Q	T	F	W	L	S	S	Q	S	A	F	R	.	.	.	.	.	.	.	.	.	.	Q	N
Query Conservation																																							.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	G	W	Q	F	T	Q	X	Y	A	T	G	T	R	S	V	R	G	I	E	A	V	T	T	G	F	P	P	S	P	S	R	A	V	V	K	L	S	K	S	Q	T	G	F	F	T	I	A	D	L	L	K	E	Q	G	Y	H	T	Q	F	I	Y	G	G	E	A	N	F	D	N	X	K	T	F	F	F	G	N	G	F
Template Known Secondary structure		T	S				T	T				S		S	S																S	S			T	T	T		G	G	G	S	S	S	B										T	T								S	S		T	T	G	G	G								T	T
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.			.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure																.																				.	.
Query SS confidence																.																				.	.
Query Sequence		G	T	A	V	T	S	I	A	M	R	A	M	E	T	.	V	Y	V	R	G	F	D	E	L	L	L	P	H	L	S	Q	A	L	Q	.	.	Q	N	T	Q	Q	K	K	L	I	V	L	H	L	N	G	S	H	E	P	A	C	S	A	Y	P	Q	S	S	A	V	F	Q	P	Q	D	D	Q	D	A	C	Y	D	N	S
Query Conservation																.																				.	.
Alig confidence																.																				.	.																						.	.										.	.
Template Conservation																																																											.	.										.	.
Template Sequence		D	Q	I	V	E	E	K	N	Y	T	N	P	G	F	V	G	S	W	G	V	S	D	E	D	L	Y	N	K	A	D	E	E	F	E	R	L	S	K	G	D	K	P	F	F	S	L	V	F	T	S	S	N	H	S	P	Y	E	.	.	Y	P	E	G	K	I	E	Q	Y	.	.	D	S	E	H	X	T	R	N	N	A
Template Known Secondary structure							G	G	G		S	S		S				T	T																				T	S	S	S										S	S	S	T	T			.	.			T	T	S	S			S	.	.	S	S	S	S	S
Template Predicted Secondary structure																																																											.	.										.	.
Template SS confidence
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.			.	.	.	.	.	460	.	.	.			.	.	.	.	.	.	470	.	.	.
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.					.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure																			.	.	.	.
Query SS confidence																			.	.	.	.
Query Sequence		I	H	Y	T	D	S	L	L	G	Q	V	F	E	L	L	K	D	.	.	.	.	R	R	A	S	V	M	Y	F	A	D	H	G	L	E	R	D	P	T	K	K	N	V	Y	F	H	G	G	R	E	A	S	Q	Q	A	Y	H	V	P	M	F	I	W	Y	S	P	V	L	G	D	G	V	D	R	T	T	E	N	N	I
Query Conservation																			.	.	.	.
Alig confidence																			.	.	.	.																		.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Sequence		V	K	Y	S	D	Y	A	L	G	T	F	F	D	K	A	K	K	S	S	Y	W	D	D	T	I	F	I	V	I	A	D	H	D	A	R	V	F	G	.	.	.	.	.	.	.	.	.	A	N	L	V	P	V	K	H	F	H	I	P	A	L	I	I	G	K	D	I	.	.	.	.	.	Q	P	R	K	D	D	R	I
Template Known Secondary structure																	T	T	S	S	S	G	G	G								S			S				S	.	.	.	.	.	.	.	.	.		S	S			G	G	G	T								S	T	T		.	.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template SS confidence
		474	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.										.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.						.	.	.	.	.	.	.	.
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	T	A	Y	N	N	Y	L	I	N	A	W	M	G	V	T	K	P	E	Q	P	Q	T	L	E	E	V	I	A	H	Y	K	G	D	S	R	V	V	D	A	N	H	D	V	F	D	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	N	N	I	D	X	P	P	T	L	L	S	L	I	G	V	D	A	K	T	P	X	I	G	R	D	L	T	K	P	L	A	R	E	D	E	R	A	X	X	Q	Y	D	K	N	F	G	Y
Template Known Secondary structure				G	G	G										T									S			T	T	S				G	G	G								T	T
Template Predicted Secondary structure
Template SS confidence
		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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