Job Description P42640 Confidence 100.00% Date Thu Jan 5 12:02:01 GMT 2012 Rank 1 Aligned Residues 341 % Identity 13% Template c2w8dB_ PDB info PDB header:transferase Chain: B: PDB Molecule:processed glycerol phosphate lipoteichoic acid synthase 2; PDBTitle: distinct and essential morphogenic functions for wall- and2 lipo-teichoic acids in bacillus subtilis Resolution 2.35 Å

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		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.			.	.	260	.	.	.	.	.	.	.		.	.
Predicted Secondary structure																									.																																										.	.											.
Query SS confidence																									.																																										.	.											.
Query Sequence		A	L	A	A	K	E	H	Q	R	L	L	S	I	A	N	T	V	P	Y	F	Q	L	S	.	V	R	D	T	G	I	D	T	Y	V	L	I	V	G	E	S	V	R	V	D	N	M	S	L	Y	G	Y	T	R	S	T	T	P	Q	V	E	A	Q	R	K	Q	.	.	I	K	L	F	N	Q	A	I	S	G	.	A	P
Query Conservation																									.																																										.	.											.
Alig confidence																									.																																										.	.											.
Template Conservation
Template Sequence		A	D	S	S	D	V	T	E	V	E	N	Y	X	K	A	N	Y	D	V	P	N	N	V	Y	F	G	K	A	E	G	K	N	V	I	Y	V	S	L	E	S	L	Q	S	F	I	I	D	Y	K	I	D	G	K	E	V	T	P	F	L	N	K	L	A	H	D	N	E	T	F	Y	F	D	N	F	F	H	Q	T	G	Q
Template Known Secondary structure				G	G	G											T						T	T	T	T	T	T	T	T	T									T	T			G	G	G	T	T				T	T			S	S									S	S	S	S				S	S							T
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.							.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.											.	.	320	.	.	.	.	.	.	.	.			.	330	.
Predicted Secondary structure																					.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.												.	.
Query SS confidence																					.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.												.	.
Query Sequence		Y	T	A	L	S	V	P	L	S	L	T	A	D	S	V	L	S	H	D	.	.	.	.	.	.	I	H	N	Y	P	D	N	I	I	N	M	A	N	Q	A	G	F	Q	T	F	W	L	S	S	Q	S	A	F	R	.	.	.	.	.	.	.	.	.	.	Q	N	G	T	A	V	T	S	I	A	M	.	.	R	A	M
Query Conservation																					.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.												.	.
Alig confidence																					.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation
Template Sequence		G	K	S	D	A	E	F	X	X	E	N	S	L	Y	P	L	A	Q	G	S	V	F	V	N	K	A	Q	N	T	L	Q	S	V	P	A	I	L	K	S	K	N	Y	T	S	A	T	F	H	G	N	T	Q	T	F	W	N	R	N	E	X	Y	K	A	E	G	I	D	K	F	F	D	S	A	Y	Y	D	X	N	E	E
Template Known Secondary structure		T																S	S	S							T	T	S									G	G	G	G	T								S	S		T	T	G	G	G									T							G	G	G	S				T	T
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.		.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		E	T	V	Y	V	R	G	F	D	E	L	L	L	P	H	L	S	Q	A	L	Q	Q	N	T	Q	Q	K	K	L	I	V	L	H	L	N	G	S	H	E	P	A	C	.	S	A	Y	P	Q	S	S	A	V	F	Q	P	Q	D	D	Q	D	A	C	Y	D	N	S	I	H	Y	T	D	S	L	L	G	Q	V	F	E	L
Query Conservation																																												.
Alig confidence																									.																			.
Template Conservation																									.
Template Sequence		N	T	K	N	Y	G	X	K	D	K	P	F	F	K	E	S	X	P	L	L	E	S	L	.	P	Q	P	F	Y	T	K	F	I	T	L	S	N	H	F	P	F	G	X	D	E	G	D	T	D	F	P	A	G	D	F	G	D	S	V	V	D	N	Y	F	Q	S	A	H	Y	L	D	Q	S	I	E	Q	F	F	N	D
Template Known Secondary structure		T	B		S	S	S	B															T	S	.		S	S									S	S		T	T					B	T	T	B							S	S
Template Predicted Secondary structure																									.
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.		.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
		411	.	.					.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.						.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
Predicted Secondary structure					.	.	.	.																						.	.	.	.	.
Query SS confidence					.	.	.	.																						.	.	.	.	.
Query Sequence		L	K	D	.	.	.	.	R	R	A	S	V	M	Y	F	A	D	H	G	L	E	R	D	P	T	K	K	N	.	.	.	.	.	V	Y	F	H	G	G	R	E	A	S	Q	Q	A	Y	H	V	P	M	F	I	W	Y	S	P	V	L	G	D	G	V	D	R	T	T	E	N	N	I	F	S	T	A	Y	N	N	Y	L
Query Conservation					.	.	.	.																						.	.	.	.	.
Alig confidence					.	.	.	.																						.	.	.	.	.																									.	.	.	.	.
Template Conservation																																																											.	.	.	.	.
Template Sequence		L	K	K	D	G	L	Y	D	K	S	I	I	V	X	Y	G	D	H	Y	G	I	S	E	N	H	N	K	A	X	A	K	V	L	G	K	D	E	I	T	D	Y	D	N	A	Q	L	Q	R	V	P	L	F	I	H	A	A	G	.	.	.	.	.	V	K	G	E	K	V	H	K	Y	A	G	D	V	D	V	A	P	T
Template Known Secondary structure					T	S		G	G	G									S		S	S		G	G	G								T	T	S	S										T	T	B								T	T	.	.	.	.	.	S							S				G	G	G
Template Predicted Secondary structure																																																											.	.	.	.	.
Template SS confidence
		455	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.						.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.
		482	.	.	.	.	.	.	.	490	.	.	.	.	.		.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		I	N	A	W	M	G	V	T	K	P	E	Q	P	Q	.	T	L	E	E	V	I	A	H	Y	K	G	D	S	R	V	V	D	A	N	H	D	V	F	D	Y	V	M	L	R	K	E	F	T	E	D	K	Q	G	N	P	T	P	E	G	Q
Query Conservation																.
Alig confidence																.
Template Conservation
Template Sequence		I	L	H	L	L	G	V	D	T	K	D	Y	L	X	S	G	S	D	I	L	S	K	E	H	R	E	V	I	P	F	R	N	G	D	F	I	S	P	K	Y	T	K	I	S	G	K	Y	Y	D	T	K	T	G	K	E	L	D	E	S	E
Template Known Secondary structure						T	T				T	T	S							T	T	S	T	T								T	T	S					S	S					T	T					T	T	T			B			T	T	T
Template Predicted Secondary structure
Template SS confidence
		530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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