Job Description P42640 Confidence 99.95% Date Thu Jan 5 12:02:01 GMT 2012 Rank 16 Aligned Residues 255 % Identity 17% Template c2gsoB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:phosphodiesterase-nucleotide pyrophosphatase; PDBTitle: structure of xac nucleotide2 pyrophosphatase/phosphodiesterase in complex with vanadate Resolution 1.30 Å

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		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																																																		.																										.	.	.	.	.	.
Query SS confidence																																																		.																										.	.	.	.	.	.
Query Sequence		I	D	T	Y	V	L	I	V	G	E	S	V	R	V	D	N	M	S	L	Y	G	Y	T	R	S	T	T	P	Q	V	E	A	Q	R	K	Q	I	K	L	F	N	Q	A	I	S	G	A	P	.	Y	T	A	L	S	V	P	L	S	L	T	A	D	S	V	L	S	H	D	I	H	N	Y	P	D	.	.	.	.	.	.
Query Conservation																																																		.																										.	.	.	.	.	.
Alig confidence																			.	.	.	.	.																											.																										.	.	.	.	.	.
Template Conservation																			.	.	.	.	.
Template Sequence		P	H	A	L	L	L	I	S	I	D	G	L	R	A	D	M	L	.	.	.	.	.	D	R	G	I	T	P	N	L	S	H	L	A	R	E	G	V	R	A	R	W	M	A	P	S	Y	P	S	L	T	F	P	N	H	Y	T	L	V	T	G	L	R	P	D	H	H	G	I	V	H	N	S	M	R	D	P	T	L	G
Template Known Secondary structure											T	T			G	G	G	G	.	.	.	.	.	S	S	S	S											S				S						S	S		S																		S			S	S	S				T	T	T
Template Predicted Secondary structure																			.	.	.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.						.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
																					295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.		.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																											.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																											.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	I	N	M	A	N	Q	A	G	F	Q	T	F	W	L	S	S	Q	S	A	F	R	Q	N	G	T	A	V	T	S	I	A	M	R	A	M	E	T	V	Y	V	R	G	F	D	E	L	L	L	P	H	L	S	Q	A	L	Q	.	Q	N
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																											.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.																																							.
Template Conservation																																					.	.	.	.
Template Sequence		G	F	W	L	S	K	S	E	A	V	G	D	A	R	W	W	G	G	E	P	V	W	V	G	V	E	N	T	G	Q	H	A	A	T	W	.	.	.	.	S	W	P	G	S	E	A	A	I	K	G	V	R	P	S	Q	W	R	H	Y	Q	K	G	V	R	L	D	T	R	V	D	A	V	R	G	W	L	A	T	D	G
Template Known Secondary structure					T	T						T		G	G	G			S										T	T						S	.	.	.	.	S		T	T	T	T	S		B	T	T	B			S	B						T	T																		G
Template Predicted Secondary structure																																					.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.					.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.					.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.																.	.
Query SS confidence																																																													.	.	.	.																.	.
Query Sequence		T	Q	Q	K	K	L	I	V	L	H	L	N	G	S	H	E	P	A	C	S	A	Y	P	Q	S	S	A	V	F	Q	P	Q	D	D	Q	D	A	C	Y	D	N	S	I	H	Y	T	D	S	L	L	G	Q	V	F	E	L	L	K	D	.	.	.	.	R	R	A	S	V	M	Y	F	A	D	H	G	L	E	R	.	.
Query Conservation																																																													.	.	.	.																.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.																.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	Q	R	N	R	L	V	T	L	Y	F	E	H	V	D	E	A	G	H	.	.	.	.	.	.	.	.	.	.	.	D	H	G	P	E	S	R	Q	Y	A	D	A	V	R	A	V	D	A	A	I	G	R	L	L	A	G	M	Q	R	D	G	T	R	A	R	T	N	I	I	V	V	S	D	H	G	M	A	E	V	A
Template Known Secondary structure		G	G																		.	.	.	.	.	.	.	.	.	.	.				T	T	S																									T		G	G	G								S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.												.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	G	H	A	I	S	V	E	D	I	A	P	P	Q	I	A	T	A	I	T	D	G	Q	V	I	G	F	E	P	L	P	G	Q	Q	A	A	A	E	A	S	V	L	G	A	H	D	H	Y	D	C	W	R	K	A	E	L	P	A	R	W	Q	Y	G	S	H	P	R	I	P	S	L	V	C	Q	M	H	E	G	W	D
Template Known Secondary structure		T	T									S		T	T	T							B	S								T	T										S				T	T						G	G	G	S		G	G	G			S		S	T	T	S		S							T	T
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
											429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.				.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																																																				.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																																																																				.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	D	P	T	K	K	N	V	Y	F	H	G	G	R	E	A	S	Q	Q	A	Y	H	V	P	M	F	I	W	Y	S	P	V	L	G	D	G	V	D	R	T	T	E	N	N	I	F	S	T	A	Y	N	N	Y	L	I	N	A	W	M	G	V	T	K	P	E	Q	P	Q	.	.	.	T
Query Conservation		.	.	.	.	.	.	.	.	.																																																																				.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.												.																			.					.	.	.	.																													.	.	.
Template Conservation																						.																			.					.	.	.	.
Template Sequence		A	L	F	P	D	K	L	A	K	R	A	Q	R	G	T	R	G	S	H	G	.	Y	D	P	A	L	P	S	M	R	A	V	F	L	A	Q	G	P	D	.	L	A	Q	G	.	.	.	.	K	T	L	P	G	F	D	N	V	D	V	Y	A	L	M	S	R	L	L	G	I	P	A	A	P	N	D	G	N	P	A	T
Template Known Secondary structure											S				S							.	S		T	T	S	G	G	G		B						S	T	T	.	B		S	S	.	.	.	.								G	G	G									T	T					S		S	S		T	T	T
Template Predicted Secondary structure																						.																			.					.	.	.	.
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.		.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.		.	.	.	.					.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
		497	.	.	500	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	E	V	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	P	A	L	R
Template Known Secondary structure		T	G	G	G	B
Template Predicted Secondary structure
Template SS confidence
		419	420	.	.	.	.

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions