|   |
287 | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | D | I | H | N | Y | P | D | N | I | I | N | M | A | N | Q | A | G | F | Q | T | F | W | L | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | Q | S | A | F | R | Q | N | G | T | A | V | T | S | I | A | M | R | A | M | E | T | V | Y | V | R | G | F | D | E | L | L | L | P | H | L | S | Q | A | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|
|   |   |   |
|
|   |   |
|
|   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |   |
|
|
|
|
|   |
|   |   |   |
|   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|   |
|   |   |
|   |   |
|   |
|   |
|
|   |
|
|
|
|   |
|
|
|   |   |
|
|
|
|
|   |
|
|
|
|   |   |
|   |   |
|
Template Sequence |   |
F | K | P | T | N | L | D | N | T | I | G | E | V | L | S | Q | H | G | L | R | Q | L | R | I | A | E | T | E | K | Y | P | H | V | T | F | F | M | S | G | G | R | E | E | E | F | P | G | E | D | R | I | L | I | N | S | P | K | V | P | T | Y | D | L | K | P | E | M | S | A | Y | E | V | T | D | A | L | L | K | E | I |
Template Known Secondary structure |   |
S |
|
|
|
|
|
| S |
|  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  | G | G | G |  |  |  |  | T | T | T | T | T | T | S |
|
| S |
|
| T | T |  |  |  |  |  |  |
|
|
| S |
| S | S | G | G | G | S | T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
308 | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . |
  |
  |   |
352 | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | |
|
|
|
. | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | Q | N | T | Q | Q | K | K | L | I | V | L | H | L | N | G | S | . |
. |
. |
. |
H | E | P | A | C | S | A | Y | P | Q | S | S | A | V | F | Q | P | Q | D | D | Q | D | A | C | Y | D | N | S | I | H | Y | T | D | S | L | L | G | Q | V | F | E | L | L | K | D | R | R | A | S | V | M | Y | F | A | D | H | G | L | E |
Query Conservation |   |
  |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   | . | . | . | . |
|   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|
|
|
|   |   |
|
|
|
|   |   |
Alig confidence |   |
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   | . | . |   |   |   |
|
|
|
|
|
|
|   |
|   |
|   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |   |
|
|
|   |
|
|
|   |
|
|   |   |
|
|
|
|   |   |
|
|   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
E | A | . |
. |
D | K | Y | D | A | I | I | L | N | Y | A | N | P | D | M | V | G | H | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | G | K | L | E | P | T | I | K | A | V | E | A | V | D | E | C | L | G | K | V | V | D | A | I | L | A | K | G | G | I | A | I | I | T | A | D | H | G | N | A |
Template Known Secondary structure |   |
 | T | . | . | T |
|
| S |  |  |  |  |  |  |
|  |  |  |  |  |  | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| S | S | B | S | T |
Template Predicted Secondary structure |   |
 |
| . | . |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
388 | . | |
|
390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . |
  |
  |   |
428 | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | D | P | T | K | K | N | V | Y | F | H | G | G | R | E | A | S | Q | Q | A | Y | H | V | P | M | F | I | W | Y | S | P | V | L | G | D | G | V | D | R | T | T | E | N | N | I | F | S | T | A | Y | N | N | Y | L | I | N | A | W | M | G | V | T | K | P | E | Q | P | Q | T | L | E | E | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   | . | . | . | . |
|   |
|   |   |
|   |   |   |   |   |
|
|   |   |   |
|
|
|
|
|   |   |   |
|   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|   |
|
|
|
|   |   |
|   |   |
|   |
|   |
|
|
|
Template Sequence |   |
D | E | . |
. |
. |
. |
V | L | T | P | D | G | K | P | Q | T | A | H | T | T | N | P | V | P | V | I | V | T | K | K | G | I | . |
. |
. |
. |
. |
. |
. |
. |
K | L | R | D | G | G | I | L | G | D | L | A | P | T | M | L | D | L | L | G | L | P | Q | P | K | E | M | T | G | K | S | L | I |
Template Known Secondary structure |   |
T |
| . | . | . | . |
| B |
| T | T | S |
| B |
|
| S |
| B |
|
|
|  |  |  |  |  |
|
| T | T |
| . | . | . | . | . | . | . | . |
| B |
| S | S |  |  | G | G | G |  |  |  |  |  |  |  |  |  | T |
|
|
|
| T | T |
|
|
|
|
| S | B |
Template Predicted Secondary structure |   |
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
449 | 450 | |
|
|
|
. | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . |
  |