Job Description P45762 Confidence 6.90% Date Thu Jan 5 12:03:39 GMT 2012 Rank 81 Aligned Residues 92 % Identity 18% Template c3mydA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:flagellar biosynthesis protein flha; PDBTitle: structure of the cytoplasmic domain of flha from helicobacter pylori Resolution 2.40 Å

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		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	V	F	S	A	L	L	I	N	A	G	I	D	R	G	N	T	D	E	I	V	Q	S	I	A	D	Y	I	D	V	D	D	S	P	R	F	H	G	A	E	D	S	F	Y	Q	S	Q	T	P	P	R	H	S	A	N	Q	M	L	F	L	T	G	E	L	R	Q	I	K	G	I	T	E	N	I	Y	Q	R	L	I
Query Conservation
Alig confidence											.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template Conservation											.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template Sequence		R	S	V	L	Q	A	L	L	H	.	E	K	I	P	I	K	D	M	L	T	I	L	E	T	I	T	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	L	V	Q	N	D	V	N	I	L	.	.	.	.	.	.	T	E	Q	V	R	A	R	L	S
Template Known Secondary structure											.	T	T																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G	T	T						.	.	.	.	.	.							T
Template Predicted Secondary structure											.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template SS confidence
		571	.	.	.	.	.	.	.	.		580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.																											.	.	600	.	.	.	.	.	.	.	.							.	610	.	.	.	.	.	.	.
		204	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.								.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure							.																												.	.	.	.	.	.	.
Query SS confidence							.																												.	.	.	.	.	.	.
Query Sequence		P	Y	V	C	V	.	L	P	T	T	E	L	S	I	N	L	N	M	L	T	E	N	D	I	P	L	F	R	A	L	F	L	N	.	.	.	.	.	.	.	N	I	T	D	A	D	A	R	V	L	L	Q	K
Query Conservation							.																												.	.	.	.	.	.	.
Alig confidence							.																												.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	V	I	T	N	A	F	K	S	E	D	G	R	L	K	F	L	T	F	S	T	D	S	E	Q	F	L	L	N	K	L	R	E	N	G	T	S	K	S	L	L	L	N	V	G	E	L	Q	K	L	I	E	G
Template Known Secondary structure											T	T	S																		T					T	T
Template Predicted Secondary structure
Template SS confidence
		618	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions