Return to main results Retrieve Phyre Job Id

Job DescriptionP45762
Confidence38.90%DateThu Jan 5 12:03:39 GMT 2012
Rank19Aligned Residues28
% Identity32%Templatec3e0dA_
PDB info PDB header:transferase/dnaChain: A: PDB Molecule:dna polymerase iii subunit alpha; PDBTitle: insights into the replisome from the crystral structure of2 the ternary complex of the eubacterial dna polymerase iii3 alpha-subunit
Resolution4.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   235....240.........250... ......260..
Predicted Secondary structure 






.


Query SS confidence 


















.








Query Sequence  NNITDADARVLLQKRPREG. WLTTDAFLY
Query Conservation    

   
  

  
   
.     

  
Alig confidence 


















.








Template Conservation 



      

  
   


 
  

  
Template Sequence  KNVGEMAARAILEERERGGPFKSLGDFLK
Template Known Secondary structure  SS

S
S

S
Template Predicted Secondary structure 










Template SS confidence 




























   895....900.........910.........920...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions