Job Description P45762 Confidence 24.90% Date Thu Jan 5 12:03:39 GMT 2012 Rank 29 Aligned Residues 71 % Identity 14% Template c2ihmA_ PDB info PDB header:transferase/dna Chain: A: PDB Molecule:dna polymerase mu; PDBTitle: polymerase mu in ternary complex with gapped 11mer dna2 duplex and bound incoming nucleotide Resolution 2.40 Å

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		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.						.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																																										.	.	.	.	.
Query SS confidence																																										.	.	.	.	.
Query Sequence		N	Q	M	L	F	L	T	G	E	L	R	Q	I	K	G	I	T	E	N	I	Y	Q	R	L	I	P	Y	V	C	V	L	P	T	T	E	L	S	I	N	L	.	.	.	.	.	N	M	L	T	E	N	D	I	P	L	F	R	A	L	F	L	N	N	I	T	D	A	D	A	R	V	L	L	Q	K	R	P	R	E	G
Query Conservation																																										.	.	.	.	.
Alig confidence																															.	.	.	.	.							.	.	.	.	.															.	.														.	.	.	.
Template Conservation																															.	.	.	.	.																										.	.														.	.	.	.
Template Sequence		P	C	P	V	A	S	L	S	Q	L	H	G	L	P	Y	F	G	E	H	S	T	R	V	I	Q	E	L	L	E	.	.	.	.	.	H	G	T	C	E	E	V	K	Q	V	R	C	S	E	R	Y	Q	T	M	K	L	F	T	Q	V	.	.	F	G	V	G	V	K	T	A	N	R	W	Y	Q	.	.	.	.	E	G
Template Known Secondary structure		S	S				S	G	G	G	G	T	T		T	T															.	.	.	.	.		S											S											T	S	.	.	T	T												.	.	.	.	T	T
Template Predicted Secondary structure																															.	.	.	.	.																										.	.														.	.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.						.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.					.	.
		254	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	T	T	D	A	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	T	L	D	E	L
Template Known Secondary structure				S
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions