Job Description P45762 Confidence 16.94% Date Thu Jan 5 12:03:39 GMT 2012 Rank 37 Aligned Residues 85 % Identity 16% Template c1u5tA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:appears to be functionally related to snf7; PDBTitle: structure of the escrt-ii endosomal trafficking complex Resolution 3.60 Å

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		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.							.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.
Query Sequence		N	L	N	A	L	A	K	I	S	D	D	P	L	A	S	P	D	F	P	A	Q	V	F	S	A	L	L	I	N	A	G	I	D	R	G	N	T	D	E	I	V	Q	S	I	A	D	Y	I	D	V	D	D	S	P	R	F	H	G	A	E	D	S	F	Y	Q	S	Q	T	P	.	.	.	.	.	.	P	R	H	S	A
Query Conservation																																																																							.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	V	E	F	A	K	K	H	N	S	E	L	Q	A	S	P	E	F	R	S	K	F	M	H	M	C	S	S	I	G	I	D	P	L	S	L	F	.	.	.	.	.	.	.	.	.	.	.	.	D	R	D	K	H	L	F	T	V	N	D	F	Y	Y	E	V	C	L	K	V	I	E	I	C	R	Q	T	K	D	M
Template Known Secondary structure											T	T	T	T	T	T																T							T	.	.	.	.	.	.	.	.	.	.	.	.	T	S	S	G	G	G	T	T																				T	T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.													80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190					.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure														.	.	.	.
Query SS confidence														.	.	.	.
Query Sequence		N	Q	M	L	F	L	T	G	E	L	R	Q	.	.	.	.	I	K	G	I	T	E	N	I	Y	Q	R
Query Conservation														.	.	.	.
Alig confidence														.	.	.	.
Template Conservation
Template Sequence		N	G	G	V	I	S	F	Q	E	L	E	K	V	H	F	R	K	L	N	V	G	L	D	D	L	E	K
Template Known Secondary structure		S	S	S										T	T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions