Job Description P33927 Confidence 9.77% Date Thu Jan 5 11:52:49 GMT 2012 Rank 25 Aligned Residues 97 % Identity 23% Template d2j8cm1 SCOP info Bacterial photosystem II reaction centre, L and M subunits Bacterial photosystem II reaction centre, L and M subunits Bacterial photosystem II reaction centre, L and M subunits Resolution 1.87

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		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.									.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.																						.	.
Query SS confidence																													.	.	.	.	.	.	.	.																						.	.
Query Sequence		D	I	V	A	R	V	L	A	I	M	G	M	V	S	V	G	F	L	L	F	I	L	F	T	S	N	P	.	.	.	.	.	.	.	.	F	S	R	T	L	P	N	F	P	I	E	G	R	D	L	N	P	L	L	Q	D	.	.	P	G	L	I	F	H	P	P	L	L	Y	M	G	Y	V	G	F	S	V	A	F	A
Query Conservation																													.	.	.	.	.	.	.	.																						.	.
Alig confidence																													.	.	.	.	.	.	.	.																						.	.						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	L	S	L	F	S	G	L	M	W	F	F	T	I	G	I	W	F	W	Y	Q	A	G	W	N	P	A	V	F	L	R	D	L	F	F	F	S	L	E	P	P	A	P	E	Y	G	L	S	F	A	A	P	L	K	E	G	G	L	W	L	I	A	.	.	.	.	.	.	.	.	.	.	.	.	S	F	F	M	F
Template Known Secondary structure																								T	T	T								S	T	T	T			B					G	G	G	T	T		S		S		G	G	G	T							.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.													.	120	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	I	A	S	L	L	S	G	R	L	D	S	T	Y	A	R	F	T	R	P	W	T	L	A	A	W	I	F	L	T	L	G	I	V	L	G	S	A	W	A	Y	Y	E	L	G	W
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.
Template Sequence		V	A	V	W	S	W	W	G	R	T	Y	L	R	A	Q	A	L	G	M	G	K	H	T	A	W	A	F	.	.	.	.	.	.	.	.	L	S	A	I	W	L	W	M	V	L	G	F
Template Known Secondary structure																		T	T			S							.	.	.	.	.	.	.	.												T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150									.	.	.	.	.	.	.	.	.	160	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions