Job Description P33927 Confidence 63.91% Date Thu Jan 5 11:52:49 GMT 2012 Rank 1 Aligned Residues 90 % Identity 14% Template c3cfuA_ PDB info PDB header:lipoprotein Chain: A: PDB Molecule:uncharacterized lipoprotein yjha; PDBTitle: crystal structure of the yjha protein from bacillus2 subtilis. northeast structural genomics consortium target3 sr562 Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		516	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.													.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	S	G	D	S	V	D	I	H	E	Y	R	F	T	F	R	D	V	K	E	V	T	G	.	.	.	.	.	.	.	.	.	.	.	.	P	N	W	R	G	G	V	A	T	I	G	V	T	R	D	G	K	P	E	T	V	L	Y	A	E	K	R	Y	Y	N	T	A	G	S	M	M	T	E	A	A	I	D	G	G	I
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	I	G	E	T	F	K	A	G	H	T	N	F	T	V	N	K	V	D	R	V	Q	K	G	E	Y	X	N	V	G	G	A	T	I	K	D	D	E	E	R	L	I	I	E	V	T	X	E	N	I	G	E	D	S	I	S	Y	N	F	I	G	F	D	L	R	D	K	N	D	Q	S	V	R	P	V	F	S	I	E	E
Template Known Secondary structure			T	T						T	T													S	S		B			S	S				B				S													S	S	S						G	G	G						T	T			B							S	T	T
Template Predicted Secondary structure
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		584	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	D	L	Y	A	A	L	G	E	E	L	E	N	G	A	W	A	V	R	L	Y	Y
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		K	G	R	I	L	X	G	.	G	T	L	V	S	G	K	K	V	T	G	V	L	S	Y
Template Known Secondary structure		T	T	T	B				.					T	T
Template Predicted Secondary structure									.
Template SS confidence
		151	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions