Job Description P33927 Confidence 7.38% Date Thu Jan 5 11:52:49 GMT 2012 Rank 45 Aligned Residues 48 % Identity 17% Template c2p3wB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:probable serine protease htra3; PDBTitle: crystal structure of the htra3 pdz domain bound to a phage-derived2 ligand (fgrwv) Resolution 1.70 Å

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		515	.	.	.	.	520		.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.		.	.	560	.	.	.	.
Predicted Secondary structure								.																																						.
Query SS confidence								.																																						.
Query Sequence		M	K	S	G	D	S	.	V	D	I	H	E	Y	R	F	T	F	R	D	V	K	E	V	T	G	P	N	W	R	G	G	V	A	T	I	G	V	T	R	D	G	K	P	E	.	T	V	L	Y	A	E	K
Query Conservation								.																																						.
Alig confidence								.									.	.																												.
Template Conservation																	.	.
Template Sequence		I	Q	D	G	D	I	I	V	K	V	N	G	R	P	L	.	.	V	D	S	S	E	L	Q	E	A	V	L	T	E	S	P	L	L	L	E	V	R	R	G	N	D	D	L	L	F	S	I	A	P	E	V
Template Known Secondary structure				T	T							T	T				.	.		S												S	S								T	T
Template Predicted Secondary structure																	.	.
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.			.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions