Job Description P33927 Confidence 6.93% Date Thu Jan 5 11:52:49 GMT 2012 Rank 57 Aligned Residues 75 % Identity 17% Template c1sddB_ PDB info PDB header:blood clotting Chain: B: PDB Molecule:coagulation factor v; PDBTitle: crystal structure of bovine factor vai Resolution 2.80 Å

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		513	.	.	.	.	.	.	520	.	.	.								.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.
Query Sequence		V	R	M	K	S	G	D	S	V	D	I	.	.	.	.	.	.	.	H	E	Y	R	F	T	F	R	D	V	K	E	V	T	G	P	N	W	R	G	G	V	A	T	I	G	V	T	R	D	G	K	P	E	T	V	L	Y	A	E	K	R	Y	Y	N	T	A	G	S	M	M	T	E	A	A	I	D	G	G	I	T	R
Query Conservation													.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.																							.												.
Template Conservation																																										.												.
Template Sequence		I	R	A	E	V	D	D	V	I	Q	V	R	F	K	N	L	A	S	R	P	Y	S	L	H	A	H	G	L	S	N	A	I	Q	P	N	K	T	Y	T	Y	.	V	W	H	A	T	T	R	S	G	P	E	.	N	P	G	S	A	C	R	A	W	A	Y	Y	S	A	V	N	P	E	K	D	I	H	S	G	L	I	G
Template Known Secondary structure						T	T											S	S	S		B						T					B		T	T						.						T	T	T	S			.	S	S	S		S										S	S						T	T	T
Template Predicted Secondary structure																																										.												.
Template SS confidence
		1607	.	.	1610	.	.	.	.	.	.	.	.	.	1620	.	.	.	.	.	.	.	.	.	1630	.	.	.	.	.	.	.	.	.	1640	.	.	.	.	.	.		.	.	.	1650	.	.	.	.	.	.	.		.	.	1660	.	.	.	.	.	.	.	.	.	1670	.	.	.	.	.	.	.	.	.	1680	.	.	.	.
		586	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	Y	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	L	L	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1706	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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