|   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | |
|
|
|
|
. | . | . | . | . | . | . | |
. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
| . | . | . | . | . |
|
|
|
|
|
|
| . |
|
|
|
|  |  |  |
|
|
|
|  |  |  |
|
|
| . | . | . | . | . |
|
|  |  |  |
|  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | V | D | I | K | L | G | V | N | K | F | H | V | D | E | G | H | P | H | I | I | L | A | E | . |
. |
. |
. |
. |
N | P | D | I | N | E | F | . |
H | K | L | M | K | A | C | P | A | G | L | Y | K | Q | D | D | A | . |
. |
. |
. |
. |
G | N | I | H | F | D | S | A | G | C | L | E | C | G | T | C | R | V | L | C | G |
Query Conservation |   |
  |   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |   | . | . | . | . | . |   |   |
|   |   |
|   | . |   |   |
|   |   |   |
|
|   |   |
|
|   |   |   |   |   | . | . | . | . | . |
|   |
|   |
|   |   |   |   |
|
|   |
|
|   |
|   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|
|   |
|   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |
|
|   |
|   |   |   |
|
|
Template Sequence |   |
L | L | S | S | V | A | L | S | G | T | N | H | E | H | D | Q | P | A | H | L | T | L | K | D | D | S | V | P | V | N | R | N | L | S | I | Y | D | G | P | E | Q | R | F | C | P | A | G | V | Y | E | F | V | P | L | E | Q | G | D | G | F | R | L | Q | I | N | A | Q | N | C | V | H | C | K | T | C | D | I | K | D | P |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T | T |
| B |
|
| S | S | S |
|
| S |  |  |  | S | S | T | T |  |  |  |  | T |  |  |  |  |  |
|
| T |  |  |  |  |
| T | T |
|
|  |  |  |  |  |
| S | S | T | T |
|  |  |  |  |  |
| G | G | G |
|
|
|
|
|  |  |  |  |  |
| T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
485 | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . |
  |
  |   |
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | T | I | L | E | Q | W | Q | Y | P | A | G | T | F | G | I | D | F | R | Y |
Query Conservation |   |
  |   |
|
|   |   |
|   |   |
|   |
|   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
| . |   |   |   |   |
|   |
|
|   |
|   |   |
|   |   |
Template Sequence |   |
S | Q | N | I | . |
N | W | V | V | P | E | G | G | G | G | P | A | Y | N | G |
Template Known Secondary structure |   |
T |
|
|  | . |  |  |
|
|
| S | T | T |
| B |
|
|
| S |
|
Template Predicted Secondary structure |   |
|
|
|  | . |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
565 | . | . | . | |
. | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . |
  |