Job Description P0A8L1 Confidence 100.00% Date Thu Jan 5 11:08:05 GMT 2012 Rank 11 Aligned Residues 254 % Identity 20% Template d1nyra4 SCOP info Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain Resolution 2.80

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		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	H	V	T	L	G	E	M	H	S	G	L	D	F	A	A	A	V	K	L	T	G	S	R	F	V	V	M	K	G	Q	I	A	R	M	H	R	A	L	S	Q	F	M	L	D	L	H	T	E	Q	H	G	Y	S	E	N	Y	V	P	Y	L	V	N	Q	D	T	L	Y	G	T	G	Q	L	P	K	F	A	G	D	L
Query Conservation
Alig confidence																				.	.	.																											.
Template Conservation																				.	.	.																											.
Template Sequence		D	H	R	K	I	G	K	E	L	E	L	F	T	N	S	Q	L	V	.	.	.	G	A	G	L	P	L	W	L	P	N	G	A	T	I	R	R	E	I	E	R	Y	I	V	D	K	E	.	V	S	M	G	Y	D	H	V	Y	T	P	V	L	A	N	V	D	L	Y	K	T	S	G	H	W	D	H	Y	Q	E	D	M
Template Known Secondary structure										T	T						T	T	T	.	.	.																											.			T	T								S				T							T						T	T	S	S
Template Predicted Secondary structure																				.	.	.																											.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.				260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.		.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	H	T	R	P	L	E	E	E	A	D	T	S	N	Y	A	L	I	P	T	A	E	V	P	L	T	N	L	V	R	G	E	I	I	D	E	D	D	L	P	I	K	M	T	A	H	T	P	C	F	R	S	E	A	G	S	Y	G	R	D	T	R	G	L	I	R	M	H	Q	F	D	K	V	E	M	V	Q	I	V	R
Query Conservation
Alig confidence											.	.	.																																													.	.	.
Template Conservation											.	.	.																																													.	.	.
Template Sequence		F	P	P	M	Q	L	D	E	T	.	.	.	E	S	M	V	L	R	P	M	N	C	P	H	H	M	M	I	Y	A	N	K	P	H	S	Y	R	E	L	P	I	R	I	A	E	L	G	T	M	H	R	Y	E	A	S	G	.	.	.	A	V	S	G	L	Q	R	V	R	G	M	T	L	N	D	S	H	I	F	V	R
Template Known Secondary structure								T	T	T	.	.	.							S	S	S										T	S			B	G	G	G																	T	T	.	.	.	T		B	T	T	T	B		S
Template Predicted Secondary structure											.	.	.																																													.	.	.
Template SS confidence
		318	.	320	.	.	.	.	.	.				.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370				.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	E	D	S	M	A	A	L	E	E	M	T	G	H	A	E	K	V	L	Q	L	L	G	L	P	Y	R	K	I	I	L	C	T	G	D	M	G	F	G	A	C	K	T	Y	D	L	E	V	W	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	D	Q	I	K	E	E	F	K	R	V	V	N	M	I	I	D	V	Y	K	D	F	G	F	E	D	Y	S	F	R	L	S	Y	R	D	P	E	D	K	E	K	Y	F	D	D	D	D	M	W	N	K	A	E	N	M	L	K	E	A	A	D	E	L	G	L	S	Y	E	E	A	I	G	E	A	A	F	Y	G	P	K
Template Known Secondary structure		G	G	G																			T	T																S	S	S	S	S																													S		S	B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
									349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	A	Q	N	T	Y	R	E	I	S	S	C	S	N	V	W	D	F	Q	A	R	R	M	Q	A	R	C	R	S	K	S	D	K	K	T	R	L	V	H	T	L	N	G	S	G	L	A	V	G	R	T	L	V	A	V
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.													.
Template Conservation																					.
Template Sequence		L	D	V	Q	V	K	T	A	M	G	K	E	E	T	L	S	T	A	Q	.	L	D	F	L	L	P	E	R	F	D	L	T	Y	I	G	Q	D	G	E	H	H	R	P	V	V	I	H	R	G	V	V	S	T	M	E	R	F	V	A	F	L
Template Known Secondary structure									T	T	S										.			S	S					T	T						T	T	S
Template Predicted Secondary structure																					.
Template SS confidence
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490		.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions