Job Description P0A8L1 Confidence 98.85% Date Thu Jan 5 11:08:05 GMT 2012 Rank 56 Aligned Residues 220 % Identity 17% Template d1nnha_ SCOP info Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain Resolution 1.65

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		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	H	R	A	L	S	Q	F	M	L	D	L	H	T	E	Q	H	G	Y	S	E	N	Y	V	P	Y	L	V	N	Q	D	T	L	Y	G	T	G	Q	L	P	K	F	A	G	D	L	F	H	T	R	P	L	E	E	E	A	D	T	S	N	Y	A	L	I	P	T	A	E	V	P	L	T	N	L	V	R	G	E	I
Query Conservation
Alig confidence																.																	.																									.	.	.	.	.
Template Conservation																.																	.																									.	.	.	.	.
Template Sequence		D	I	Q	T	K	I	L	E	Y	M	T	D	F	F	.	V	K	E	G	F	K	W	L	L	P	V	I	I	S	P	I	.	T	D	P	L	W	P	D	P	A	G	E	G	M	E	P	A	E	V	E	I	Y	G	V	K	.	.	.	.	.	M	R	L	T	H	S	M	I	L	H	K	Q	L	A	I	A	M	G	L
Template Known Secondary structure																.			T	T											S		.						S		T	T												T	T			.	.	.	.	.					S		S										T	T
Template Predicted Secondary structure																.																	.																									.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.						70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.				.	.	.	.	290	.	.	.	.	.		.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																					.	.	.											.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.											.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	D	E	D	D	L	P	I	K	M	T	A	H	T	P	C	F	R	S	E	A	G	S	Y	G	R	D	T	R	G	L	I	R	M	H	.	.	.	Q	F	D	K	V	E	M	V	Q	I	.	V	R	P	E	D	S	M	A	A	L	E	E	M	T	G	H	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																					.	.	.											.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.																		.	.	.	.	.	.	.				.	.	.											.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Template Sequence		K	.	.	.	.	.	.	.	K	I	F	V	L	S	P	N	I	R	L	E	S	R	Q	K	D	.	.	.	.	.	.	.	D	G	R	H	A	Y	E	F	T	Q	L	D	F	E	V	E	R	A	K	M	E	D	I	M	R	L	I	E	R	L	V	Y	G	L	F	R	K	A	E	E	W	T	G	R	E	F	P	K
Template Known Secondary structure			.	.	.	.	.	.	.														G	G	G		.	.	.	.	.	.	.	S	S	S			S											T																										S	S
Template Predicted Secondary structure			.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Template SS confidence
		89								90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.								.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
											313	.	.	.	.	.	.	320	.											.	.	.	.	.	.	.	.	330	.	.	.	.				.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure		.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.														.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.														.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	E	K	V	L	Q	L	L	G	L	.	.	.	.	.	.	.	.	.	.	P	Y	R	K	I	I	L	C	T	G	D	M	G	.	.	.	F	G	A	C	K	T	Y	D	L	E	V	W	I	P	A	Q	N	T	Y	R	E	I	S	S	C	S	N	V	W	D	F	Q	A	R	R	M
Query Conservation		.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.														.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.														.	.	.														.	.	.	.
Template Conservation																																																											.	.	.	.
Template Sequence		T	K	R	F	E	V	F	E	Y	S	E	V	L	E	E	F	G	S	D	E	K	A	S	Q	E	M	E	E	P	F	W	I	I	N	I	P	R	E	F	Y	D	R	E	V	D	G	F	W	R	N	Y	D	L	I	L	P	Y	.	.	.	.	G	Y	G	E	V	A	S	G	G	E	R	E	W	E	Y	E	K	I	V
Template Known Secondary structure			S	S													T	S	S									S	S											T	T	B				T	T										T	T	.	.	.	.	T	T									B
Template Predicted Secondary structure																																																											.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.					.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		371	.	.	.	.	.	.	.	.	380	.	.	.	.												.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	R	C	R	S	K	S	D	K	K	T	R	L	.	.	.	.	.	.	.	.	.	.	.	V	H	T	L	N	G	S	G	L	A	V	G	R	T	L	V	A	V	M	E	N	Y	Q	Q	A	D	G	R	I	E	V	P	E
Query Conservation																.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.														.	.	.	.	.	.	.	.	.	.	.																												.
Template Conservation		.																																																				.
Template Sequence		.	A	K	I	R	K	A	G	L	N	E	D	S	F	R	P	Y	L	E	I	A	K	A	G	K	L	K	P	S	A	G	A	G	I	G	V	E	R	L	V	R	F	I	V	G	A	K	H	I	A	E	V	.	Q	P	F	P	R
Template Known Secondary structure		.						T	T			G	G	G	G									T	T																					T		S	S	G	G	G	G	.		S	S
Template Predicted Secondary structure		.																																																				.
Template SS confidence
			231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.		.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions