Job Description P0A8L1 Confidence 47.06% Date Thu Jan 5 11:08:05 GMT 2012 Rank 109 Aligned Residues 92 % Identity 15% Template c3u59C_ PDB info PDB header:contractile protein Chain: C: PDB Molecule:tropomyosin beta chain; PDBTitle: n-terminal 98-aa fragment of smooth muscle tropomyosin beta Resolution 2.50 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	N	L	L	R	N	E	P	D	A	V	A	E	K	L	A	R	R	G	F	K	L	D	V	D	K	L	G	A	L	E	E	R	R	K	V	L	Q	V	K	T	E	N	L	Q	A	E	R	N	S	R	S	K	S	I	G	Q	A	K	A	R	G	E	D	I	E	P	L	R	L	E	V	N	K	L	G	E	E	L	D
Query Conservation
Alig confidence																				.	.	.	.	.																																					.	.	.
Template Conservation																				.	.	.	.	.																																					.	.	.
Template Sequence		M	E	A	I	K	K	K	M	Q	M	L	K	L	D	K	E	N	A	.	.	.	.	.	I	D	R	A	E	Q	A	E	A	D	K	K	Q	A	E	D	R	C	K	Q	L	E	E	E	Q	Q	G	L	Q	K	K	L	K	G	T	E	.	.	.	D	E	V	E	K	Y	S	E	S	V	K	E	A	Q	E	K	L	E
Template Known Secondary structure																				.	.	.	.	.																																					.	.	.
Template Predicted Secondary structure																				.	.	.	.	.																																					.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.						.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	K	A	E	L	D	A	L	Q	A	E	I	R	D	I	A	L	T	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	A	E	K	K	A	T	D	A	E	A	E	V	A	S	L	N	R	R	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions